| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4266 |
|---|
| Symbol | |
|---|
| ID | 1185947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4805477 |
|---|
| End bp | 4806364 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637395611 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_794025 |
|---|
| Protein GI | 28871406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCTCAGC GCATAATTGA CATGTTTTCA TTCAAAGGGG TGAGACAGGT TATCTTCCTC
ACCACGCTAG CGATGTTGGC CTTTGCAGCC AACTCGGTTC TATGCCGCTT GGCACTTCGT
CATACTGAGA TAGACCCTAC GTCCTTTACA CTTATACGGT TGTTTAGCGG AGCCATTGTG
CTCTGGGTAA TCCTAACAAT CAAAGGCACC TCTTCTCGCT CCGCTGGGAG CTGGCTGGGT
GCGTTCACCT TGTTTGCTTA CGCGTTCGCT TTTTCATATG CGTATCTAAA TCTGGACACA
GGAACAGGCG CGCTCATTTT GTTCGGTGCC GTCCAGCTGT CTATGCTTGG ATACGGCTTT
TACAAAGGCG AAAGGATGCA TGTCGTAGCG ATTACAGGTC TTGTACTTGC TATTGGCGGC
TTGGTTGCTC TGTTACTACC AGGTGCCACG TCGCCTCCGC TGGCTAGCGC AGGGATCATG
TTGTTATCTG GCATTGCGTG GGCCGTTTAC TCGTTAATTG GAAAGCAATC GAATGACCCA
CTCGCATCTA CTACTTGGAA TTTCCTGCGA GCCGTCCCAA TGATGCTTTT GGCATCAATT
CCTTTCGCTA ATCAGCTTTC AATAGACATT TCCGGTGTCC TTTGCGCGAT TGCGTCGGGG
ACTATTGCTT CAGGAGTTGG TTATGCCATC TGGTACGCAG CGCTGCGTTC GCTTTCGTCG
TTTCAGGCAG CAAGCATCCA GCTAAGCGTT CCTGTTTTGG CATCGCTCGC AGGTGTGCTC
ATTTTAGATG AAAGCCTGAC TACTAGATTA GCGCTTACAT CGCTGGCAGT GCTTGGAGGA
ATCGGGCTGA TACTCAGCGA TAAGCGAGGA ACAAGTCCAA GAAAATGA
|
|---|
| Protein sequence | MSQRIIDMFS FKGVRQVIFL TTLAMLAFAA NSVLCRLALR HTEIDPTSFT LIRLFSGAIV
LWVILTIKGT SSRSAGSWLG AFTLFAYAFA FSYAYLNLDT GTGALILFGA VQLSMLGYGF
YKGERMHVVA ITGLVLAIGG LVALLLPGAT SPPLASAGIM LLSGIAWAVY SLIGKQSNDP
LASTTWNFLR AVPMMLLASI PFANQLSIDI SGVLCAIASG TIASGVGYAI WYAALRSLSS
FQAASIQLSV PVLASLAGVL ILDESLTTRL ALTSLAVLGG IGLILSDKRG TSPRK
|
|---|
| |