| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4265 |
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| Symbol | metC-2 |
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| ID | 1185946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4804230 |
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| End bp | 4805399 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637395610 |
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| Product | cystathionine beta-lyase |
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| Protein accession | NP_794024 |
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| Protein GI | 28871405 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT ATAAAAGCGT CCAAACTCTG CTTGCCCATG CGTCTATTGA ACCTGAGCAG
CATCACGGAT TCGTTAATAC GCCCGTTTAC CGGGGCTCAA CCGTTGCCTT TCCCACCTGC
GAGTCGATGC GCGAAGGACG TCAAAAATAC GCCTATGGAC GTTGGAACAA TCCTTCAACG
GAGGCACTCA CTGAGGCCCT TCAGCACTTG GAAGGATCGG AAGGCACGGT TCTATGCCCT
TCAGGGCTGT CCGCGTGTAC GACTGCGATA CTCTCCGTAG TCGGGACGGG TGATCACATT
TTGATTGCCG ACAATGTCTA TGCGCCAGTG AGGGTTTTCT GCGAAGAAGT GGGAAAGCGC
TTAGGGATCG GGGTGTCGTT TTACGATCCT ACGATAGGTT CCGGCATTGT TGATTTCATC
CGACCTAACA CGAAAGCGAT TTATCTAGAA TCCCCTGGTT CCCTGACGTT AGAGATACAG
GACATCCCTG CCATAGCGAA TGTTGCCCAT GACCATGACA TCATGGTTAT TGCAGACAAT
ACATGGGGCA CACCGCTTTA CTGCCCGACG ATGGAGCTTG GCGTCGACCT TTCCATCATG
GCAGCAACGA AATACATCGT CGGCCACTCC GACGCAGTTC TTGGCACCGT ATCCGCATCC
AAGCGAGCAT GGGAAAGCCT CAAGCGATAC CACTTCAATA TGGGCTTATT TGCCAGCCCG
GACGACGTGA CCCTAGCCCT TCGAGGGATG AGAACGCTAG ACGTGCGCCT GGAGCGTCAC
TATAAGAATG CGACGATAGT AGCCAAGTGG TTGGAGGGCC GAGAGGAGGT AATCGCCGTT
CATTACCCGG CATTAGAATC CCATCCCCAA CACGACTTAT GGAAACGGGA TTTCAAAGGA
GCATCTGGCT TGCTGTCGTT TACGACAAAG CCTTCCAGCC AGCCAGCAGC AGATGCTCTC
TTGGATAATC TATCGCTGTT TGCTATCGGT TACTCATGGG GTGGTTTCGA AAGTTTGGCA
ATGCTTGCGA ATCCTAAACC AGTCAGAAGT GTGACCCAAT GGGACATTGA CGGCCATCTA
GTGCGACTGC ATATCGGTCT CGAGGATCCG TATGACTTAA TCGCCGATCT CGAAGTTGGC
TTTGCACATT TCAATAGATT ACGCCGCTAG
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| Protein sequence | MKKYKSVQTL LAHASIEPEQ HHGFVNTPVY RGSTVAFPTC ESMREGRQKY AYGRWNNPST
EALTEALQHL EGSEGTVLCP SGLSACTTAI LSVVGTGDHI LIADNVYAPV RVFCEEVGKR
LGIGVSFYDP TIGSGIVDFI RPNTKAIYLE SPGSLTLEIQ DIPAIANVAH DHDIMVIADN
TWGTPLYCPT MELGVDLSIM AATKYIVGHS DAVLGTVSAS KRAWESLKRY HFNMGLFASP
DDVTLALRGM RTLDVRLERH YKNATIVAKW LEGREEVIAV HYPALESHPQ HDLWKRDFKG
ASGLLSFTTK PSSQPAADAL LDNLSLFAIG YSWGGFESLA MLANPKPVRS VTQWDIDGHL
VRLHIGLEDP YDLIADLEVG FAHFNRLRR
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