Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4259 |
Symbol | kefC |
ID | 1185940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4798755 |
End bp | 4800578 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637395604 |
Product | glutathione-regulated potassium-efflux system protein |
Protein accession | NP_794018 |
Protein GI | 28871399 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACTC ACAGCCTGAT TGAAATGCTC ATTTACTTGG GCTCGGCTGC CTTGATAGTT CCGATTGCCG TTCGGCTTGG GCTTGGCCCG GTTCTGGGTT ATCTGTTGGC CGGCTGCCTG ATCGGCCCGT GGGGCCTGAA GCTGATAACC GATGTGGAGT CCATCCTGCA CTTTGCTGAA ATCGGTGTAG TTTTGATGTT GTTTATCATT GGGCTAGAAC TTGATCCCAA ACGCCTCTGG GCAATGCGCC GAATGGTGTT CGGCGGTGGT GCATTACAGA TGCTTGCGTG TGGAGCAGCC ATCGCCGCGT TCTGCGCTGC CCTGGGCTTG AACTGGACAG CCGCGCTGTT GGTTGGCTTG ACGCTGAGCC TATCCTCGAC AGCGATTGCT ATGCAGGCAA TGAACGAGCG AAACATGACG TCAACCGCCG TGGGTCGTAG CAGCTTTGCC GTGTTGTTAT TTCAAGACAT CGCAGCCATT CCGCTTGTGG CTATGATTCC ACTGCTGGCC GCAAATGGTG GTACGCCTTC CGGTGCTGAG CTGGCACTGT CGATTGCAAA AATCGTCGGA GCCGTCGTCG CGGTGGTGCT TTTAGGTCGG TACGTTTCTC GGCCCGTCCT TCGCTTCGTC GCGCGATCCG GCCTACGCGA AATATTCAGT GCCGTCGCAC TCTTCCTAGT ATTCGGGTTC GGCCTCTTAC TCGAAGAGGC TGGCTTGTCC ATGGCCATGG GTGCTTTTCT AGCAGGCGTC CTGTTGGCCA GCTCGGAATA TCGGCATGCC CTAGAGAGCG ATATCGAACC GTTCAAGGGA CTTTTGCTCG GCCTGTTCTT CATCGGCGTG GGTATGTCCA TCGACTTCGG CACACTGATT GATGAACCAC TGAGAGTGCT CACCCTGACG TTGGGCTTTA TTGTGATCAA ACTGGTCATG ATCAAGCTCC TAGGCCGTTT CCTGAACGTC CCAAGTGACC AGCGCTCCTG GCAGGCGGTA TTCCTTGGAC AGGGCAGTGA GTTTGCTTTT GTCGTTTTTG GCGCTGCCAC AGTTGCCGGC ATCTTGATCG AGCCATGGGG TAAAAGCCTG ACTCTGGCAG TAGCGCTGTC GATGTGTGTG ACACCGTTGC TAATTCTGCT GCTCAATTAT CTGGAATCGT CGAAAAAACA GGACAGCAAG GAAGCGGACA CCATCGATCA AAGCAATCCT AGAGTGATCA TTGCTGGCTT CGGACGATTC GGCCAGATCG CTGGACGTCT ACTGATGTCT TGTGGTTTTG AAGTCGTGGT ATTGGATCAT GACCCTGACC ACATCGAGAC ACTGCGCAAA TTCGGGGTGA AGGTGTTTTA CGGTGATGCA ACCCGTCTCG ATTTGCTCCA CGCTGCGGGT GCTGCACAAG CCGTGGTGCT GATCAACGCT ATCGACAATC AGGACGACAA CCTACTACTG ACCAAGCTGG CCCAGGAGCA TTTTCCGTCT CTGAAGCTCG TGGTGCGAGC CCGTGATATG GGGCACATCA TTACCTTGCG TCAGATGGGC ATTGAGGCCG TCGAAAGGGA AACCTTTGAA AGCGCTTTAT CTCTTGGGCG TCGTGCCTTG GAACATCTAG GCGTTGGGCG CTACGAGGCT CGTGAGCGTG CCGACACATT CCGTAGGCTG AACTTGGAGA TGCTAGAGGA AATGGCCGCA CAGCCGGTGG ACGATACTGA GTTCAGATAT GACGCTTACA AACGAGCCAA CGTTTTATTA ACGGAACTCT TCAATGAAGA TCGCACCCAT CCTATCGATG GAGAGGCCAA GAAAAATGAT CCTACAACTC TGCGAGATCG ATAG
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Protein sequence | MDTHSLIEML IYLGSAALIV PIAVRLGLGP VLGYLLAGCL IGPWGLKLIT DVESILHFAE IGVVLMLFII GLELDPKRLW AMRRMVFGGG ALQMLACGAA IAAFCAALGL NWTAALLVGL TLSLSSTAIA MQAMNERNMT STAVGRSSFA VLLFQDIAAI PLVAMIPLLA ANGGTPSGAE LALSIAKIVG AVVAVVLLGR YVSRPVLRFV ARSGLREIFS AVALFLVFGF GLLLEEAGLS MAMGAFLAGV LLASSEYRHA LESDIEPFKG LLLGLFFIGV GMSIDFGTLI DEPLRVLTLT LGFIVIKLVM IKLLGRFLNV PSDQRSWQAV FLGQGSEFAF VVFGAATVAG ILIEPWGKSL TLAVALSMCV TPLLILLLNY LESSKKQDSK EADTIDQSNP RVIIAGFGRF GQIAGRLLMS CGFEVVVLDH DPDHIETLRK FGVKVFYGDA TRLDLLHAAG AAQAVVLINA IDNQDDNLLL TKLAQEHFPS LKLVVRARDM GHIITLRQMG IEAVERETFE SALSLGRRAL EHLGVGRYEA RERADTFRRL NLEMLEEMAA QPVDDTEFRY DAYKRANVLL TELFNEDRTH PIDGEAKKND PTTLRDR
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