Gene PSPTO_4245 details

Gene Information

• Locus tag: PSPTO_4245
• ID: 1185925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4781326
• End bp: 4784661
• Gene Length: 3336 bp
• Protein Length: 1111 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637395591
• Product: hypothetical protein
• Protein accession: NP_794006
• Protein GI: 28871387

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.847999
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCACC CCTGGAATCC GCTTCGCCAA GACACCTTGT TTCAATCCTA CTCTTCCCTG 
CTGGAGCAGC CCGGTATCCT GCGGCCCGAA CACGGCAGCG CACGGCAAGA TACGCTCAAC 
GCTGCGCGGC CATTTACAGT GCCACCGTTC CCTTTCCCAC CGCCTGAAAA CCCCACGCCG 
CTGCTGCCTG AAGAGCGCGA ACCTGAAGGG CAGTCTGCGC ACATCGAACG CCAACTCAAG 
GCCTTGCGCG CAAGCCCCGG TTTTAAGCTG ATTGCACACT CGGCATTGCT CCTGAAGGCT 
TGCCAGCTGG ACATGGACTT CCCACCGTCC CGACAGCACT ACGTTCGCCA ACAACTGATC 
ACGCAGCTCA CAGAGAAAAC CGGCAAGACA CTGAACCCCG ACACACTGAC GATGACCTTC 
AGCACCGAGA ACCACCCCGC TGTGGACGAC GATGGGCATG AGCGTTACAG CGCTCGCCTG 
TCGCTGACCG AGCTGGCTTT GGCTACCTTC GACCCGGCGC TGCTTGTGGC CTTGAATCGC 
AGCGATATCA CTGACATGCC GCTGTCTGAC GAGACCCCGT CACTGAGCAC CACGCAGGCG 
TTCAGGTGGG TCAGCGAGCT GCCTCTGGAC CGCGATTACA GCGCAATGCT CGAGGCTTTC 
CGGGCCCGCC ATGCAGAGAC CTTCCGCGTG TTGTCACGGT TGAGCTTTCT GGACACGCTG 
GCCCGCCAAT ACGCTTACCG GCAAATCAGC CTCGATGGCT ACGTTCTGGC GCTGGACGCC 
TTGGGGCTGA GCGAATTTCC TGTCGACGCA CAGGCGCTGG AACAAAGCGG GTGCGCGCAA 
AAATCCGAGG TTCGCGTGTT GTCACTCGGC GGCGAAACCG TGCCGGGCAT TTTCCAGATA 
CGCTCGAAAA CCACCTCGCA TTGCTTCATT CACGTGCTGG GCGCCAAGGG TAAGGTCATC 
GAATACATCA GCGATGATCC ACAACACATG ACCGACAGGC TGCTGGCAGC CATGAATGCC 
TCGGGGTTAT ACGGCCACCG ACTGCATGCC CTTGAGCAGG ACGCGCGCCT TGCTGCCGAT 
GCGCGACTGA CCACAGAAGA CCTGTTCAGT GAGCTGACGC AAGCATTGCT TGCCGAAACG 
TCGTCCAGTA GCGACACACA CTCAGACATA GAACGGCTCA CCCCCATCAC ACGCAGCCTG 
GCGCTGGCCG GGGCCGTAGA CCTCTGGCAG GCAGACGCCA GCATTGTGCA GCAGATACCG 
GTGGCGTCCA GAATGGCGGC CCAGGTAATG ACAGCGTATC TACAGGAACA CCACGGCCTG 
ACGCTCAACC CGGATCATGT GTTTATCGCC TATCAGTCCG GCAACTCAAT CAACCCGCTG 
GGCAGCCCGC GCAATCCGTC TACGTACGTT CATACCCCGG ATGAAAAACC GGTCAGCCTG 
AGCGAAGCGC TGATGAACAA TTATCGCGTT GATTACCCAC AAGGCTACCT TGACCGCGAT 
GGTCGCACGG TGGTCTTTCT CGACACCACC GGCAAAGGCG AAAGGGATCA GGGCCAATTG 
CTCGCAATCC CTGCGCAAGC ACTTGAGGGC TACATCAAGG CGTTCGGTTT TCTGTCCTGG 
ATGACGCGGC GCATTGATGA ATTCTGGGGG CAGCAGAAGG CAGCAATCGA GCAGACACTC 
CTGACCACGC TCATCACCCA GGCGTTGATC AGCCTCAAGC GCGGCCATCT CAAGCGCGGC 
GGCTTTGATC AGGTCGTAGA AGCCCTCGCG ACCTCAGCGC GGCCCCCATG GCTGGCACTG 
GGCTTTTTCG TCCAGGGCGC GCTGATCGAT GGCATGACGC ATCAATACAC CGGGCTGCTG 
GTCATTGACC AACCGGGCAA ACCGAAAGTG CTTTATCAGG CAGGGCATCC TGACGCTTTC 
ATGGAGTTCG CCGATGACAA GGCACTTGAG GGCTATCTGA ATCAGAAAAC GGCGCAAGCC 
GATTGGCGCG AGGCCGCGAT GCGCTATGTG CCGGTCCGCC ATCACCAACG CCTGGACTAC 
CTGTTCAAGC TGTGGGGCAG GGTTCAGGCC CCGAGCCCGC CCGCGTCCAT CCTGCGTCCG 
TGGACCGATG CACTGTATAA CCCTGATACA CAACAAGCCC TGCACCATTC ATTGTGCGAA 
AAAAGGCTGG AAGGCTCGCC GTTTGCCTTT TTCCACCAAC TTCTCAAACA AAACGCACTG 
GATGATGCCG AAGACAGAAT CGTGACATCG GAGCAGGTTT CGCAGGCCTA CTGGACCTCG 
CGCCTGCAGC ATTTGCAATG TTTGCTGTTG CCCATGTCGC TGTTGCTGAC ACCGGCCTTC 
GTTGCTTCAC TGGCGACAGA AATCGGCCTC ACCTCACTGA GCATTGCCGC GACTCTTTTG 
CCGGGCGGCC GCTATGCAGA AAAGAACCAG GCGCTGCTGG CCACGTTATC GCTGGGCTTG 
ATGCAGTTGG GCACGCAAAC GCCGAGGTTG CTGCGCACGC TGAGCCGAAT CGTGAAGCCT 
GCCGGGCACA CCGCGCGGGT GGCTGGCGGA TCCCTCAGTG CACCGCGCAG CGTCGCCCGG 
TTACGCCAGC GGCTCATGAA GCCGCGCCAG ACCCGGCTGG AGAAGTTCTT TCACACCGAT 
GCGCTGCTCA AGCGCTGGAG CATGGCCGAG GCTGCATCAC CAAGCCTGCT ACCGGTGCAT 
GCCTGGAAAC TGGGCCGCAG GTTTGTGTTG TGGACATCGG ACCGCGGCCA GGCGAGAACG 
CTGGTGGTCA GCACGCACGG GTATTACACG CCGTGGACGG CGACGGTGAA GATCCCCAAC 
GGCTCGGAGA TCCGCACCTA CGCCCCACAT GGCTACGAGT TGGTGGACCC CAAACTGCAT 
CGCATCGTCA ACAAGAACGT CCGGCCATTC GCGATCTCCA ATACGGCTGC AAACACGCTG 
ATTCAGCCAA CGCCACTCTT CGACTCCACG CTGATCACCG ACAAGTTCAT CGCCGGCACG 
TCACTGCCCG GCAGGCTGAA AAACTACAGC CTGTCCAAGT TCCAGACCAC CACCGATGAG 
CCCTACGAGG AGATCGCGCG GGTGGTGCGC AACTCGAATG CCTCGCCGCT CAGGGGCTGG 
CTGCCGCCGA CGCCGACGGA CGTGCTGACC GTGCGCAACC GCTTCGGCAT GACGCCTCCG 
TCACTGGCTG ATCTGTTCAA CAGTCTGTCG GTACAAGGCA TTCATTACGA CCGAATATTG 
CTGGTGCACT GTCGCTGCGC AGCAATATCG GCAGTGTTGC GCCGCGCCCC GGTCTATCAT 
GCACCCACTA CTCCGATCAT CCAGCACGGT GCCTGA 

 

Protein sequence

MNHPWNPLRQ DTLFQSYSSL LEQPGILRPE HGSARQDTLN AARPFTVPPF PFPPPENPTP 
LLPEEREPEG QSAHIERQLK ALRASPGFKL IAHSALLLKA CQLDMDFPPS RQHYVRQQLI 
TQLTEKTGKT LNPDTLTMTF STENHPAVDD DGHERYSARL SLTELALATF DPALLVALNR 
SDITDMPLSD ETPSLSTTQA FRWVSELPLD RDYSAMLEAF RARHAETFRV LSRLSFLDTL 
ARQYAYRQIS LDGYVLALDA LGLSEFPVDA QALEQSGCAQ KSEVRVLSLG GETVPGIFQI 
RSKTTSHCFI HVLGAKGKVI EYISDDPQHM TDRLLAAMNA SGLYGHRLHA LEQDARLAAD 
ARLTTEDLFS ELTQALLAET SSSSDTHSDI ERLTPITRSL ALAGAVDLWQ ADASIVQQIP 
VASRMAAQVM TAYLQEHHGL TLNPDHVFIA YQSGNSINPL GSPRNPSTYV HTPDEKPVSL 
SEALMNNYRV DYPQGYLDRD GRTVVFLDTT GKGERDQGQL LAIPAQALEG YIKAFGFLSW 
MTRRIDEFWG QQKAAIEQTL LTTLITQALI SLKRGHLKRG GFDQVVEALA TSARPPWLAL 
GFFVQGALID GMTHQYTGLL VIDQPGKPKV LYQAGHPDAF MEFADDKALE GYLNQKTAQA 
DWREAAMRYV PVRHHQRLDY LFKLWGRVQA PSPPASILRP WTDALYNPDT QQALHHSLCE 
KRLEGSPFAF FHQLLKQNAL DDAEDRIVTS EQVSQAYWTS RLQHLQCLLL PMSLLLTPAF 
VASLATEIGL TSLSIAATLL PGGRYAEKNQ ALLATLSLGL MQLGTQTPRL LRTLSRIVKP 
AGHTARVAGG SLSAPRSVAR LRQRLMKPRQ TRLEKFFHTD ALLKRWSMAE AASPSLLPVH 
AWKLGRRFVL WTSDRGQART LVVSTHGYYT PWTATVKIPN GSEIRTYAPH GYELVDPKLH 
RIVNKNVRPF AISNTAANTL IQPTPLFDST LITDKFIAGT SLPGRLKNYS LSKFQTTTDE 
PYEEIARVVR NSNASPLRGW LPPTPTDVLT VRNRFGMTPP SLADLFNSLS VQGIHYDRIL 
LVHCRCAAIS AVLRRAPVYH APTTPIIQHG A