| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4238 |
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| Symbol | |
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| ID | 1185918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4771535 |
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| End bp | 4772602 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395584 |
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| Product | ABC transporter, periplasmic substrate-binding protein |
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| Protein accession | NP_793999 |
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| Protein GI | 28871380 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.31178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGT CTCGTTTCTT CAGCCTGCTC ACCGCAGGTT TGCTGGCTGC GTTGAGCCTC
TCGGCGAATG CCGCCCAGAA AGATCACTTC AACGTCTGCT GGACCATCTA TGCAGGCTGG
ATGCCGTGGG AATACGCAGG CAGCCAGGGC ATCGTCGACA AATGGGCCAA GAAATACGGC
ATCAAGATTG ATGTCACCCA GCTCAATGAC TACGTCGAAT CCATCAACCA GTACACCGCC
GGCCAGTTCG ATGGTTGCAC CATGACCAAC ATGGACGCCC TGACCATCCC GGCCGCTGGT
GGCGTGGAAA GCACGGCGCT GATCGTCAGT GACTTCTCCA ACGGCAATGA CGGCATCGTA
CTCAAAGGCA AAGACAAGAA AGTCGCCGAC CTGAAAGGCA TGGACGTCAA TCTGGTCGAA
CTGTCGGTGT CGCATTACCT GCTGGCCCGT GCGCTGGACT CCGCCAAGCT CAGCGAAAAA
GACCTGAAAG TCGTCAACAC CTCGGATGCC GATATCTCGG CTGCTTTCAA TACCGATGAC
GTGCAGGCGG TCACCACCTG GAACCCGATG CTGTCGGACA TCAAGGCTAA GCCTGGCGTG
ACCGAGGTGT TCAACTCCAG CCAGATCCCT GGCGAGATTA TGGACATGAT GGTCGTCAAT
ACTCAGACCC TGAAGGATAA CCCGGCCCTG GGCAAAGCCC TGACCGGCGC ATGGTTTGAA
GTGGTCGCGC TGATGAACGC CAAAAACGCC CAGAGCAAAA CCGCACTGGA GCACATGGCC
AAGGCATCGG GTACTGATCT GGCCGGTTTC CAGGCGCAGC TCGACACCAC CAGGCTGTTC
GCCACGCCCA AGGAAGCGCT TGAGTTCGCC ACCAGCAAAC AACTGCCCGA CACCCAGCGC
AAGGTCGCGG ACTTCTCGTT TGCCCACGGC TTGCTCGGTG AAGGCGCGCG TGATGCGAAC
GCGGTCGGCA TGACATTTGC CAATGACGTG GTCCTCGGCG ACAAGGCCAA TCTCAAGCTG
CACTTTGACC CCAGCTACGT GCAGATGGCC GCCGACGGCA AGCTGTAA
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| Protein sequence | MQKSRFFSLL TAGLLAALSL SANAAQKDHF NVCWTIYAGW MPWEYAGSQG IVDKWAKKYG
IKIDVTQLND YVESINQYTA GQFDGCTMTN MDALTIPAAG GVESTALIVS DFSNGNDGIV
LKGKDKKVAD LKGMDVNLVE LSVSHYLLAR ALDSAKLSEK DLKVVNTSDA DISAAFNTDD
VQAVTTWNPM LSDIKAKPGV TEVFNSSQIP GEIMDMMVVN TQTLKDNPAL GKALTGAWFE
VVALMNAKNA QSKTALEHMA KASGTDLAGF QAQLDTTRLF ATPKEALEFA TSKQLPDTQR
KVADFSFAHG LLGEGARDAN AVGMTFANDV VLGDKANLKL HFDPSYVQMA ADGKL
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