Gene PSPTO_4236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4236 
Symbolung 
ID1185916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4769631 
End bp4770323 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content59% 
IMG OID637395582 
Producturacil-DNA glycosylase 
Protein accessionNP_793997 
Protein GI28871378 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCG ATGACCGCAT CAAGCTTGAG CCAAGCTGGA AAGAAGCCCT GCGTGACGAA 
TTCGAGCAGC CTTACATGGC GCAGCTGCGC GAGTTTCTGC GTCAGGAGCA TGCCGCTGGC
AAGGAGATCT ATCCGCCGGG GCCGTTGATT TTCAATGCGC TGAACTCCAC GCCGCTGGAC
AACGTAAAAG TCGTCATTCT CGGTCAGGAC CCGTACCACG GCCCTAACCA GGCCCACGGC
TTGTGCTTCT CGGTGCAGCC AGGCGTGCCG ACGCCGCCTT CGCTGGTCAA CATTTATAAA
GAGCTGAAAC GCGACCTGAA CATCGATATT CCGAACCACG GTTGCCTGCA ATCCTGGGCT
GATCAGGGCG TGCTGATGCT CAATACCACC CTGACGGTCG AGCGCGCCAA TGCTGCGTCT
CATGCGGGAA AGGGCTGGCA GCATTTTACC GACCGGATTA TTCAGGTGGT CAGCGAGCAT
CAGCCGCATC TGGTGTTTTT GCTGTGGGGC GCTCACGCGC AAGGCAAGCA GAAGCTGGTC
GATGCGACCA AGCATCTGGT GCTGACCTCG GTCCATCCGT CGCCGCTGTC GGCGTACAAA
GGCTTTCTGG GCAACGGGCA CTTCGGGCGC GCCAACAAGT ACCTTGAGCA AAACGGCCTG
GCGCCGATCG ACTGGCGATT GCCTGCACTC TGA
 
Protein sequence
MTSDDRIKLE PSWKEALRDE FEQPYMAQLR EFLRQEHAAG KEIYPPGPLI FNALNSTPLD 
NVKVVILGQD PYHGPNQAHG LCFSVQPGVP TPPSLVNIYK ELKRDLNIDI PNHGCLQSWA
DQGVLMLNTT LTVERANAAS HAGKGWQHFT DRIIQVVSEH QPHLVFLLWG AHAQGKQKLV
DATKHLVLTS VHPSPLSAYK GFLGNGHFGR ANKYLEQNGL APIDWRLPAL