| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4234 |
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| Symbol | |
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| ID | 1185914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4767071 |
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| End bp | 4768585 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395580 |
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| Product | membrane protein TctA, putative |
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| Protein accession | NP_793995 |
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| Protein GI | 28871376 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACTT TCAGCTATCT GGGCCAAGGC TTCGGCGTCG CGCTCACCCC GTACAACCTG
ATCACCGCAC TGTCAGGCAC GCTGATCGGC ACCGTCGTCG GCCTGCTGCC GGGGCTGGGA
CCGATCAACG GCGTGGCGCT GCTGATCCCC ATCGCCTTTG CTCTGGGCCT GCCGCCCGAA
TCAGCACTGA TTCTGCTGGC GGCTGTTTAT TTGGGCTGCG AGTATGGCGG CCGCATCAGT
TCCATTTTGC TGAACATTCC GGGCGAAGCG TCCACGGTCA TGACCACGCT GGACGGTTAT
CCGATGGCGC GTCAGGGCTT GGCCGGGGTT GCGCTATCGC TGTCGGCCTG GAGCTCGTTC
ATCGGTGCGC TGATTGCCAC CTGCGGCATG GTGCTGTTCG CGCCGTTGCT CGCAAAGTGG
GCAATTGCCT TCGGTCCTGC GGAATATTTC GTACTGATGG TGTTCGCCAT CGTCTGTCTG
GGCGGCATGG CTGGCGACAA GCCCCTGAAG ACGTTCATTG CTGCGCTGAT CGGCCTGTTT
CTGTCTGCGG TGGGCATTGA TGCCAACAGC GGGGTGTATC GTTTTACCGG GGACAACATT
CACCTGACCG ATGGCATTCA GTTCGTGGTG CTGGTTCTGG GACTGTTTTC GATCAGCGAA
ATCCTGTTGC TGCTGGAGAA AACCCATCGA GATCAGGAGG CGGTCAAAGC CACCGGGCGC
ATGATGTTCA ATTTCAAGGA AGCGGCCTCG GTGTTCGTGG TCAACATTCG CTGCGGGCTA
TTGGGCTTCA TTCTCGGCGT GCTGCCAGGT GCCGGGGCAA CGCTGGCCAG CGCGGTCGCT
TACATGACGG AAAAGCGTAT CGCCGGCCCG ACTGGCAAAT TCGGTCAGGG TGACATGCGC
GGCCTGGCAG CCCCGGAAAC CGCCATCGGC GCCAGTGCCT GTGGCGCGCT GGTGCCGATG
CTGACGCTGG GCGTTCCGGG CTCGGGCACT ACGGCAGTGA TGATCGGTGC GCTGTCGCTG
TACAACATCA CGCCGGGGCC GATGCTGTTT CAGCAGCAGC CGGACATTGT CTGGGGTCTG
ATCGCCTCAT TGTTCATCGC CAACATCATG CTAGTGATCC TCAACATTCC GATGATCCGT
ATCTTCACCC GCATCCTCGC CGTACCAAAC TGGGCGCTGG TGCCAGTGAT CGCGATCATT
ACCGGGATCG GCGTGTACGC GGTGCATGCC ACCACTTTTG ACCTGTTCCT GATGGTCGGC
ATCGGCATCT TCGGTTACAT CCTGCGCAAG CTGGACTTCC CGCTGTCACC GATCCTGCTC
GGCTTCATCC TCGGTGGGCT GATGGAGCAG AACCTGCGCC GTGCCCTGTC GATCTCCAAT
GGCGAGCTGG GCATTCTCTG GGCCAGCCCG ATCACGCTGG GCGTCTGGGT GGTGACCGTA
CTGATGATGC TGTTCCCGCT GATTCGTATC TGGCGCAAGC GCGCAAAACA GCGGGCTGCC
ATGACGCATG GCTGA
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| Protein sequence | MDTFSYLGQG FGVALTPYNL ITALSGTLIG TVVGLLPGLG PINGVALLIP IAFALGLPPE
SALILLAAVY LGCEYGGRIS SILLNIPGEA STVMTTLDGY PMARQGLAGV ALSLSAWSSF
IGALIATCGM VLFAPLLAKW AIAFGPAEYF VLMVFAIVCL GGMAGDKPLK TFIAALIGLF
LSAVGIDANS GVYRFTGDNI HLTDGIQFVV LVLGLFSISE ILLLLEKTHR DQEAVKATGR
MMFNFKEAAS VFVVNIRCGL LGFILGVLPG AGATLASAVA YMTEKRIAGP TGKFGQGDMR
GLAAPETAIG ASACGALVPM LTLGVPGSGT TAVMIGALSL YNITPGPMLF QQQPDIVWGL
IASLFIANIM LVILNIPMIR IFTRILAVPN WALVPVIAII TGIGVYAVHA TTFDLFLMVG
IGIFGYILRK LDFPLSPILL GFILGGLMEQ NLRRALSISN GELGILWASP ITLGVWVVTV
LMMLFPLIRI WRKRAKQRAA MTHG
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