| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4231 |
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| Symbol | tctD |
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| ID | 1185911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4764401 |
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| End bp | 4765072 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395577 |
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| Product | DNA-binding response regulator TctD |
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| Protein accession | NP_793992 |
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| Protein GI | 28871373 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTGTTC TTCTTGTGGA AGATCATCTG CAATTGGCTG AAAGTGTCGC GCAGGCGCTC
AAGAGCGCGG GTTTGACCGT GGATGTGCTG CACGATGGCG TTGCCGCCGA CCTGGCGCTG
AGCAGCGAAG AGTACGCCGT CGCCATTCTC GATGTCGGTC TTCCGCGCAT GGACGGTTTT
GAAGTGCTGG CACGTTTACG GGCGCGCAGC AAGAACCTGC CGGTGCTTAT GCTGACCGCC
CGCAGCGACG TCAAAGACCG GGTTCACGGC CTGAATCTGG GGGCCGACGA TTACCTGGCC
AAGCCGTTCG AGCTCTCCGA GCTGGAAGCC AGGGTCAAGG CACTGTTGCG TCGCAGTGTG
CTGGGCGGCG AGCGCCAGCA GCGCTGTGGT GTACTGGCCT ACGATCTGGA CACGCGCCGT
TTTACATTGA GCGATGAGTT GCTCACGTTG ACCTCCCGCG AACAGGCGGT GCTCGAAGCC
TTGATCGCCC GGCCGGGCAG GGTCATGAGC AAAGAGCAAC TGGCCGCGCA GGTGTTCGGC
CTCGATGAAG AGGCCAGTCC TGACGCCATC GAAATCTACG TCCATCGTCT GCGCAAGAAG
CTCGACGGGC ATTCTGTGGG CATCGTGACC TTCCGGGGTC TGGGGTATCT GCTTGAAAGT
CGCGATGATT AA
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| Protein sequence | MRVLLVEDHL QLAESVAQAL KSAGLTVDVL HDGVAADLAL SSEEYAVAIL DVGLPRMDGF
EVLARLRARS KNLPVLMLTA RSDVKDRVHG LNLGADDYLA KPFELSELEA RVKALLRRSV
LGGERQQRCG VLAYDLDTRR FTLSDELLTL TSREQAVLEA LIARPGRVMS KEQLAAQVFG
LDEEASPDAI EIYVHRLRKK LDGHSVGIVT FRGLGYLLES RDD
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