| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4228 |
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| Symbol | |
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| ID | 1185908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4761138 |
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| End bp | 4762085 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395574 |
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| Product | hypothetical protein |
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| Protein accession | NP_793989 |
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| Protein GI | 28871370 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGG CCCACACAGC TTTTTTCTGC ACGCTATCCC ATGAGGGCGT TCTCGCCGTT
CGCGGCGTGG ATGCCGGCAA ATTTCTTCAG GGTCAGTTGA CGTGCAACCT CAATTATCTC
GACGAGAACA CCTCCAGCCT GGGCGCACGT TGCACCCAGA AAGGCCGTAT GCAGTCGAGT
TTTCGCCTCG TTTTCGAAGG TGACGGCTGT TTGCTGGCGA TGGCCAGCGA GCTGATCGAG
CCGCAATTGC TGGACCTGCG CAAGTACGCA GTGTTCTCCA AATCAAAACT GACTGACGAA
AGTTCAGCCT GGGTGCGTTT CGGCCTGCAG GAAGGTGACG GTGCGCTGGT CGGTCTGGGG
CTGGATCTGC CTCAGGACAC CGGCACTGTG GTGCGCGCCA ACGAACTGAT CGCAATTCGT
GTCTCCCCGG CGCGCGCTGA ACTCTGGGTC CGCGCCGAAC AGGCCGACAC CCTCAAAGCG
CGCCTGGCAT CACAACTGGC CGAAGGCCCG CTGAATGACT GGCTGCTGGG TCAGATCCGA
GTCGGTATCG GTCAGGTGTT CGGCAGTACC CGCGAGGAAT TCATCCCGCA GATGATCAAC
CTGCAAGCGG TCGGCGGAGT CAGCTTCAAA AAGGGCTGCT ATACCGGTCA GGAAATCGTT
GCGCGAATGC AATATCTTGG CAAACTCAAG CGCAGGCTTT ACCGCCTGAC GCTGCGCAGC
GATGAAATCC CGGCACCGGG CACTGCGCTG TTTTCCCCAG TGCATGGCAG CGCGGTGGGC
AATGTGGTGA TCGCCGCACA GGCCGGCCAG GACGTCGAAC TGCTGGCTGT CCTGCAGGGC
GATGCGGCAG AAAACGGTCA CATACATCTC GGCTCGCCCG AGGGCGCTGC ACTGCACATG
AATGAACTGC CCTACACACT GGACAGCAAA CTCGAAACTC AGCGCTAG
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| Protein sequence | MTMAHTAFFC TLSHEGVLAV RGVDAGKFLQ GQLTCNLNYL DENTSSLGAR CTQKGRMQSS
FRLVFEGDGC LLAMASELIE PQLLDLRKYA VFSKSKLTDE SSAWVRFGLQ EGDGALVGLG
LDLPQDTGTV VRANELIAIR VSPARAELWV RAEQADTLKA RLASQLAEGP LNDWLLGQIR
VGIGQVFGST REEFIPQMIN LQAVGGVSFK KGCYTGQEIV ARMQYLGKLK RRLYRLTLRS
DEIPAPGTAL FSPVHGSAVG NVVIAAQAGQ DVELLAVLQG DAAENGHIHL GSPEGAALHM
NELPYTLDSK LETQR
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