| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4224 |
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| Symbol | rpoE |
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| ID | 1185904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4757624 |
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| End bp | 4758205 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637395570 |
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| Product | RNA polymerase sigma-24 factor |
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| Protein accession | NP_793985 |
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| Protein GI | 28871366 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAACCC AGGAAGAGGA TCAGGCGCTT GTCGAGCGCG TACAGCGCGG CGATACAAGA
GCATTTGATC TGCTGGTGCT GAAATATCAG CACAAAATTC TAGGGTTGAT CGTGCGGTTC
GTGCACGACA CCCATGAGGC TCAAGACGTT GCACAGGAAG CTTTTATCAA GGCTTACCGT
GCACTCGGAA ACTTTCGCGG CGACAGTGCT TTTTATACAT GGCTGTACCG CATCGCCATC
AACACGGCGA AAAACTATTT GGTATCGCGA GGTCGGCGAC CGCCAGATAG CGATGTCAGG
TCTGAAGACG CGGAGTTCTA CGATGGCGAT CACGGCCTCA AGGACATCGA GTCGCCGGAA
CGTGCATTGC TGAGGGATGA GATCGAGGGC ACCGTCCATC GGACCATCCA GCTTCTCCCG
GAAGATTTAC GTACGGCACT AACTTTACGT GAATTCGACG GTCTGAGTTA CGAAGACATT
GCGAGCGTCA TGCAGTGTCC TGTTGGTACC GTGCGCTCTC GAATCTTTCG CGCTCGGGAA
GCCATCGATA AAGCCCTGCA GCCGTTGTTG CAGGAATCCT GA
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| Protein sequence | MLTQEEDQAL VERVQRGDTR AFDLLVLKYQ HKILGLIVRF VHDTHEAQDV AQEAFIKAYR
ALGNFRGDSA FYTWLYRIAI NTAKNYLVSR GRRPPDSDVR SEDAEFYDGD HGLKDIESPE
RALLRDEIEG TVHRTIQLLP EDLRTALTLR EFDGLSYEDI ASVMQCPVGT VRSRIFRARE
AIDKALQPLL QES
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