| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4220 |
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| Symbol | lepA |
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| ID | 1185900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4752342 |
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| End bp | 4754129 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395566 |
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| Product | GTP-binding protein LepA |
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| Protein accession | NP_793981 |
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| Protein GI | 28871362 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.438138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTCATA TCCGCAATTT CTCCATCATC GCCCACATTG ACCATGGCAA GTCGACGCTG
GCCGACCGCT TCATTCAAAT GTGCGGCGGC CTGTCCGAGC GCGAAATGGA AGCGCAGGTG
CTCGACTCCA TGGACCTCGA GCGCGAGCGC GGGATCACCA TCAAGGCCCA TAGCGTTACC
CTGTATTACA AGGCCAAAGA CGGTATCACC TACCAACTGA ACTTCATCGA CACGCCGGGG
CACGTGGACT TCACCTACGA AGTCAGCCGT TCCCTGGCTG CGTGCGAAGG TGCGTTGCTG
GTCGTCGATG CCGGTCAGGG TGTAGAGGCG CAGTCGGTTG CCAACTGCTA CACCGCCATC
GAGCAGGGCC TTGAGGTCAT GCCGGTGCTG AACAAGATGG ACTTGCCGCA GGCCGATCCG
GACCGCGTCA AGGAAGAAAT CGAAAAAATC ATCGGCATCG ACGCCACCGA TGCCGTGGCG
TGCAGCGCCA AGAGCGGCAT GGGCGTAGAT GAAGTGCTCG AGCGTCTGGT AGCGACCATC
CCGCCACCGA CCGGCGACAT CGAAGCGCCG CTGCAAGCGT TGATCATCGA CTCCTGGTTC
GACAACTACC TGGGCGTCGT GTCGCTGGTA CGTGTGCGTC ACGGCCGGGT CAAAAAGGGT
GACAAAATCC TCGTCAAGTC CACCGGCAAG CTTCATCTGG TCGACAGCGT GGGCGTGTTC
AACCCCAAGC ACTCTGCAAC CGTCGATCTG AAAGCGGGCG AAGTAGGCTT CATCATCGCC
GGCATCAAAG ACATTCACGG TGCGCCGGTC GGCGACACCC TGACCCTGAG CACTACACCC
GACGTAGACG TGCTGCCAGG CTTCAAGCGT ATCCAGCCGC AGGTTTACGC CGGCCTGTTC
CCGGTCAGCT CCGACGATTT CGAAGACTTC CGTGAAGCGC TGCAGAAGCT GACGCTGAAC
GACTCTTCCC TGCAGTATTC GCCGGAAAGC TCCGACGCAC TGGGCTTCGG CTTCCGTTGC
GGCTTCCTCG GCATGCTGCA CATGGAGATC ATCCAGGAGC GCCTGGAGCG CGAGTACAAC
CTCGACCTGA TCACCACTGC GCCAACCGTA ATCTTCGAGT TGCTGCTCAA GACCGGTGAG
ACGATCTACG TCGACAACCC GTCCAAGCTG CCTGACCTGT CGGCCATCGA AGATATGCGC
GAGCCCATCG TCCGGGCAAA TATTCTTGTG CCGCAGGAGC ACCTGGGCAA CGTCATTACG
TTGTGCATTG AAAAGCGTGG CGTCCAGCAC GACATGCTGT TCCTCGGTAC TCAGGTGCAA
GTGAGCTACG ATTTGCCGAT GAACGAAGTG GTCCTCGACT TCTTCGACCG TCTCAAATCG
GTCAGCCGCG GTTACGCTTC CCTGGATTAC CATTTTGATC GTTACCAGTC TGCCAACCTG
GTCAAGCTCG ACGTTCTGAT CAACGGCGAG AAGGTCGATG CCCTGGCGTT GATCGTTCAC
CGCGACAACG CGCACTACAA AGGCCGTGCG TTGACCGAGA AGATGAAAGA GCTGATCCCT
CGACAGATGT TCGACGTTGC AATTCAGGCT GCCATCGGTG GTCAGATTGT TGCCCGGACA
ACCGTCAAGG CGCTTAGAAA GAACGTATTG GCCAAATGCT ACGGCGGCGA CGTCAGCCGC
AAGCGTAAAT TGCTGGAAAA GCAAAAGGCC GGTAAGAAAC GCATGAAGCA GGTCGGCAAC
GTGGAAATTC CACAGGAAGC CTTCCTTGCC GTGCTCAGGT TGGAATAG
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| Protein sequence | MSHIRNFSII AHIDHGKSTL ADRFIQMCGG LSEREMEAQV LDSMDLERER GITIKAHSVT
LYYKAKDGIT YQLNFIDTPG HVDFTYEVSR SLAACEGALL VVDAGQGVEA QSVANCYTAI
EQGLEVMPVL NKMDLPQADP DRVKEEIEKI IGIDATDAVA CSAKSGMGVD EVLERLVATI
PPPTGDIEAP LQALIIDSWF DNYLGVVSLV RVRHGRVKKG DKILVKSTGK LHLVDSVGVF
NPKHSATVDL KAGEVGFIIA GIKDIHGAPV GDTLTLSTTP DVDVLPGFKR IQPQVYAGLF
PVSSDDFEDF REALQKLTLN DSSLQYSPES SDALGFGFRC GFLGMLHMEI IQERLEREYN
LDLITTAPTV IFELLLKTGE TIYVDNPSKL PDLSAIEDMR EPIVRANILV PQEHLGNVIT
LCIEKRGVQH DMLFLGTQVQ VSYDLPMNEV VLDFFDRLKS VSRGYASLDY HFDRYQSANL
VKLDVLINGE KVDALALIVH RDNAHYKGRA LTEKMKELIP RQMFDVAIQA AIGGQIVART
TVKALRKNVL AKCYGGDVSR KRKLLEKQKA GKKRMKQVGN VEIPQEAFLA VLRLE
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