Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4212 |
Symbol | |
ID | 1185892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4746148 |
End bp | 4746891 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395558 |
Product | methyltransferase, putative |
Protein accession | NP_793973 |
Protein GI | 28871354 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR00740] methyltransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCAAAG AACCCGACCG CCTTTTCGCC CAGCCCTTGC CCCAGGTGCC TGACTTCGCC TTCAACGAAG ACGTGGTGCG GGTTTTTCCG GACATGATCA AGCGCTCGGT GCCCGGCTAC CCGGCGATTG TCGAAAACCT CGGCGTGCTC GCCGCGCAAT TTGCCCAGCC CGACACCGTT TTGTATGACC TTGGCTGCTC ACTGGGCGCG GTGACTCAGG CCCTGCGCCG CCATGTACGC AGCGACGGCT GTGAAGTCAT TGCAATCGAT AACTCCACTG CTATGGTCGA GCGCTGCCGT GAATACCTCA ATGCGCAGAA TTCCATGTTT CAGGAGTTGT TGCCGGTGCA GGTCATTGAA GGTGACATTC TGGCGTTGGC GTTCAAGCCC GCCTCAGTGG TTGCGCTGAA TTTCACCCTG CAGTTTGTCG CGCCCGAACA ACGCCTGGCC CTGCTTGGCC GCATTCGCGG TGCGCTGGTG CCGGGCGGCG CACTCATATT GTCGGAGAAG CTACGGTTCA ATGACGAGCA GGAGCACGCG CTGCTGACCG ATCTGCACAT CGCTTTCAAG CGCGCCAACG GCTACAGCGA TCTGGAAATT GCCCAGAAAC GCAGCGCCAT CGAAAACGTC ATGAAACCCG ACAGCCTTGA AGAACACCGC CAACGCCTGC TCGCCGCCGG TTTTTCCAAG GTGGTGCCCT GGTTCCAGTG CCTTAACTTT GCCTCGTTGA TTGCCCTGCC ATGA
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Protein sequence | MSKEPDRLFA QPLPQVPDFA FNEDVVRVFP DMIKRSVPGY PAIVENLGVL AAQFAQPDTV LYDLGCSLGA VTQALRRHVR SDGCEVIAID NSTAMVERCR EYLNAQNSMF QELLPVQVIE GDILALAFKP ASVVALNFTL QFVAPEQRLA LLGRIRGALV PGGALILSEK LRFNDEQEHA LLTDLHIAFK RANGYSDLEI AQKRSAIENV MKPDSLEEHR QRLLAAGFSK VVPWFQCLNF ASLIALP
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