Gene PSPTO_4210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4210 
Symbollon-2 
ID1185890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4743030 
End bp4745447 
Gene Length2418 bp 
Protein Length805 aa 
Translation table11 
GC content60% 
IMG OID637395556 
ProductATP-dependent protease La 
Protein accessionNP_793971 
Protein GI28871352 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACC AGCAGACAGA CTCGCCAGAT TTGCCCAATG ACGCAGACGA GCACGAAGTG 
TCTCTGAGTT CCGACAGCAC CTCACTTGCC TTGCCCGGCC AGAACCTGCC TGACAAGGTT
TACATCATCC CCATCCACAA TCGTCCGTTC TTCCCGGCGC AGGTTTTGCC GGTCATCGTC
AACGAAGAAC CGTGGGCAGA AACGCTGGAG CTGGTCAGCA AGTCCGAGCA CCACTCGCTG
GCGCTGTTTT TCATGGACAC CCCGCAGGAA GATCCACGCC ACTTCAAGAC CGATGCGCTC
CCCGAGTATG GCACTTTGGT CAAGGTTCAC CACGCCAGCC GTGAAAATGG CCGGTTACAG
TTTGTCGCAC AGGGGCTGAG CCGCGTGCGC ATCCGCACCT GGCTCAAGCA TCATCGCCCG
CCTTATCTGG TGGAAGTCGA GTACCCGCAG CAGCCCAATG ACCCGACCGA CGAAGTGAAG
GCCTACGGCA TGGCCTTGAT CAATGCGATC AAGGAGCTGT TGCCACTCAA CCCGCTGTAC
AGCGAAGAGT TGAAGAATTA CCTCAACCGC TTCAGCCCCA ACGACCCTTC GCCACTCACC
GACTTCGCTG CGGCCCTGAC CTCCGCCACC GGCGTCGAAC TGCAGGAAGT GCTCGACTGT
GTGCCGATGC TCAGGCGCAT GGAGAAAGTC CTGCCGATGC TGCGCAAGGA AGTCGAAGTC
GCACGTTTGC AAAAAGAGAT CTCTGCCGAG GTGAACCGCA AGATCGGCGA GCATCAGCGT
CAGTTCTTCC TTAAAGAACA GCTCAAGGTC ATTCAGCAGG AGCTGGGGCT GAGCAAGGAC
GACCGCAGCG CCGACATCGA GCAGTTCGAG CAGCGCCTGG AAGGCAAGAC CCTGCCGCCA
CAGGCGCGCA AGAAGTTCGA CGAGGAGATC AACAAACTCA AGGTGCTGGA AACCGGCTCG
CCGGAATACG CCGTGACGCG TAACTATCTG GACTGGACCA GTTCGTTGCC GTGGGGTGTC
TACGGCGCTG ACAAGCTGGA CCTCAAGCAC GCCCGTAAAG TGCTGGATCA GCATCATGCC
GGGCTGGATG ACATCAAGGC GCGGATTCTC GAATTTCTCG CCGTGGGTGC GTACAAGGGC
GAGATCAGCG GGTCGATTGT CTTGCTGGTA GGTCCGCCGG GCGTGGGCAA GACCAGCGTC
GGGCGTTCGA TTGCCGAATC ACTGGGGCGG CCGTTCTACC GCCTGAGTGT GGGGGGCATG
CGCGACGAGG CCGAAATCAA GGGCCACCGC CGCACGTACA TCGGCGCCCA GCCGGGCAAG
CTGGTGCAGG CGCTCAAAGA TGTCGAGGTG ATGAACCCGG TCATCATGCT CGATGAAATC
GACAAGATGG GCCAAAGCTA TCAGGGCGAC CCGGCGTCTG CGCTGCTGGA AACCCTGGAC
CCGGAACAGA ACGTCGAATT CCTCGATCAT TACCTGGACC TGCGCCTGGA CCTCTCCAAA
GTCCTGTTCG TGTGCACCGC CAACACCCTG GACTCGATCC CTGGCCCGCT GTTGGACCGG
ATGGAAGTGA TTCGTCTGTC GGGCTACATC ACCGAAGAAA AGCTGGCGAT TGCCAAGCGT
CACCTGTGGC CCAAGCAGTT GGCCAAAGCC GGCGTTGCCA AGAGCAAGCT GAGCATCAGT
GACACGGCCC TGCGCGCGGT CATCGAAGGC TATGCACGGG AAGCCGGTGT GCGGCATCTG
GAAAAACAAC TGGGCAAGCT GGTGCGCAAA GCGGTCGTCA AACTGCTCGA TGCGCCGGAT
TCGGTCATCA AGATCGGGCC GAAAGACCTT GAAGCATCGC TGGGCATGCC GGTGTTCCGC
AGTGAACAAG TGCTGTCGGG CACGGGGGTG ATTACTGGCC TGGCCTGGAC CAGCATGGGC
GGCGCTACGC TGCCGATCGA GGCGACGCGT ATCCACACCC TGAACCGGGG CTTCAAACTG
ACCGGGCAGT TGGGCGATGT GATGAAAGAG TCGGCGGAAA TCGCCTACAG CTACGTCAGC
GCCAACCTGT CGAAGTTTGG TGGCGACGCG AAGTTCTTCG ACGAGGCCTT TGTGCACGTC
CACGTTCCCG AGGGCGCCAC CCCGAAGGAT GGCCCGAGTG CGGGCGTGAC CATGGCCAGT
GCCTTGCTGT CTCTGGCGCG CAATCAGCCG CCGAAAAAAG GCGTGGCCAT GACCGGCGAG
CTGACCCTGA CCGGGCACGT CCTGCCGATT GGTGGGGTAC GCGAAAAAGT CATTGCAGCG
CGCCGGCAGA AGATCCACGA ACTGATTCTT CCAGAGCCTA ACCGTGGCAA CTTTGAAGAG
CTGCCGGATT ACCTCAAAGA AGGCATCACC GTGCATTTTG CCAAGCGCTT TGCCGATGTG
GTGAAGGTGT TGTTTTAA
 
Protein sequence
MSDQQTDSPD LPNDADEHEV SLSSDSTSLA LPGQNLPDKV YIIPIHNRPF FPAQVLPVIV 
NEEPWAETLE LVSKSEHHSL ALFFMDTPQE DPRHFKTDAL PEYGTLVKVH HASRENGRLQ
FVAQGLSRVR IRTWLKHHRP PYLVEVEYPQ QPNDPTDEVK AYGMALINAI KELLPLNPLY
SEELKNYLNR FSPNDPSPLT DFAAALTSAT GVELQEVLDC VPMLRRMEKV LPMLRKEVEV
ARLQKEISAE VNRKIGEHQR QFFLKEQLKV IQQELGLSKD DRSADIEQFE QRLEGKTLPP
QARKKFDEEI NKLKVLETGS PEYAVTRNYL DWTSSLPWGV YGADKLDLKH ARKVLDQHHA
GLDDIKARIL EFLAVGAYKG EISGSIVLLV GPPGVGKTSV GRSIAESLGR PFYRLSVGGM
RDEAEIKGHR RTYIGAQPGK LVQALKDVEV MNPVIMLDEI DKMGQSYQGD PASALLETLD
PEQNVEFLDH YLDLRLDLSK VLFVCTANTL DSIPGPLLDR MEVIRLSGYI TEEKLAIAKR
HLWPKQLAKA GVAKSKLSIS DTALRAVIEG YAREAGVRHL EKQLGKLVRK AVVKLLDAPD
SVIKIGPKDL EASLGMPVFR SEQVLSGTGV ITGLAWTSMG GATLPIEATR IHTLNRGFKL
TGQLGDVMKE SAEIAYSYVS ANLSKFGGDA KFFDEAFVHV HVPEGATPKD GPSAGVTMAS
ALLSLARNQP PKKGVAMTGE LTLTGHVLPI GGVREKVIAA RRQKIHELIL PEPNRGNFEE
LPDYLKEGIT VHFAKRFADV VKVLF