| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4200 |
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| Symbol | |
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| ID | 1185880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4731544 |
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| End bp | 4732293 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637395546 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_793961 |
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| Protein GI | 28871342 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.662349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAC TCAAACAAAA GCGGGCAGTG ATTACCGGTG CAGGCAGCGG CATTGGTGCT
GCCATCGCCC GCGCCTACGC CGTTGAAGGC GCGTATCTGG TGCTGGGTGA TCGTGATCCG
GTCAACCTGG CAAACATCGC CGAACACTGC CGCCAGCTCG GCGCGCAGGT GCATGAATGC
GTGGCCGACG TCGGCAGTGT CGAGGGTGCA CAGGCCAGCG TCGATGCCTG CGTCGAGCAT
TTCGGCGGCA TCGATATTCT GGTCAATAAC GCTGGCATGC TCACCCAGGC ACGCTGTGTC
GACCTGAGCA TCGAGATGTG GAACGACATG CTGCGCGTTG ATCTGACCAG CGTGTTCGTG
GCCAGCCAGC GGGCCTTGCC GCACATGATT GCGCAGCGCT GGGGACGCAT CATCAACGTC
GCCTCGCAAC TGGGCATCAA GGGTGGCGCC GAACTGACCC ATTACGCCGC CGCCAAGGCC
GGAGTCATCG GCTTCAGCAA ATCGCTGGCG CTGGAAGTCG CCAAAGACAA CGTGCTGGTC
AACGCCATCG CGCCCGGTCC TATCGAAACG CCGCTGGTGG CTGGCATCAG CAGCGCCTGG
AAAACCGCCA AGGCCGCCGA GCTGCCGCTG GGTCGTTTCG GGCTGGCCGA AGAGGTCGCG
CCCGTGGCTG TGCTGCTGGC CAGCGAGCCG GGTGGCAACC TGTTCGTCGG CCAGACACTG
GGCCCCAATT CCGGCGATGT CATGCCATGA
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| Protein sequence | MQQLKQKRAV ITGAGSGIGA AIARAYAVEG AYLVLGDRDP VNLANIAEHC RQLGAQVHEC
VADVGSVEGA QASVDACVEH FGGIDILVNN AGMLTQARCV DLSIEMWNDM LRVDLTSVFV
ASQRALPHMI AQRWGRIINV ASQLGIKGGA ELTHYAAAKA GVIGFSKSLA LEVAKDNVLV
NAIAPGPIET PLVAGISSAW KTAKAAELPL GRFGLAEEVA PVAVLLASEP GGNLFVGQTL
GPNSGDVMP
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