Gene PSPTO_4180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4180 
SymbolmetR 
ID1185860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4710627 
End bp4711544 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content62% 
IMG OID637395526 
Producttranscriptional activator MetR 
Protein accessionNP_793941 
Protein GI28871322 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.439628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGAAA TACGCCACCT CAAAACCTTG CACGCCCTGC GCGAGGCCGA CAGCCTTGTG 
GATGCCGCTG AACGCCTGCA CCTGACGCAG TCGGCGCTGT CCCATCAGTT CAAAGAGCTG
GAAGAGCGCA TGGGCATGCC ACTGTTTGTG CGCAAGACCA AGCCGGTGCG CTTCACCAGC
GCCGGTTTGC GCCTGCTGCA ACTGGCGGAC TCGATGCTGC CGCAACTGCG CAGTGCCGAG
CGCGACATCG CCCGTCTGGC GGGCGGCACG GCGGGACGGC TGCACATGGC GATCGAGTGC
CACAGTTGCT TTCAGTGGCT GATGCCAACC ATCGACCAGT TCCGTGATGC CTGGCCCGAG
GTCGAACTGG ACCTGTCTTC CGGCTTCTCG TTTGCGCCGC TGCCTGCGCT GGCGCGTGGC
GATCTGGACC TGGTGGTGAC GTCCGACCCG CTGGAATTGC CCGGTATCAC TTATGTGCCG
CTGTTCACGT ATGAAGCGAT GCTGGCGGTG GCCAATCAGC ATGCATTGGC GAGCAAGCCG
TACATCGTTC CAGAGGACTT GCTCCCTGAA ACGCTGATCA CCTACCCGGT GGAGCGCGAC
CGGCTGGACA TTTTCACCCG TTTTCTGGAG CCCGCCGACA TCGAGCCCGC ACAGGTGAGG
ACCTCGGAGC TGACAGTGAT GATGATGCAA CTGGTCGCCA GCGGCCGTGG CGTGTGCGGC
ATGCCGCATT GGGCGCTGCA TGAATACAGC TCACGCGGCT ATGTGAAGGC CAAACGGCTG
GGCGAGAAAG GACTTTTTGC GACCCTGTAT GCCGGCATTC GCGCCGACAT GCTCGACGCA
CCGTACATGC GCGACTTTCT GTTGACCGCC AAGGACACGT CGTTCTCGAC GCTGGACGGT
GTGAGCGTGG TCCGCTAA
 
Protein sequence
MLEIRHLKTL HALREADSLV DAAERLHLTQ SALSHQFKEL EERMGMPLFV RKTKPVRFTS 
AGLRLLQLAD SMLPQLRSAE RDIARLAGGT AGRLHMAIEC HSCFQWLMPT IDQFRDAWPE
VELDLSSGFS FAPLPALARG DLDLVVTSDP LELPGITYVP LFTYEAMLAV ANQHALASKP
YIVPEDLLPE TLITYPVERD RLDIFTRFLE PADIEPAQVR TSELTVMMMQ LVASGRGVCG
MPHWALHEYS SRGYVKAKRL GEKGLFATLY AGIRADMLDA PYMRDFLLTA KDTSFSTLDG
VSVVR