| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4175 |
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| Symbol | |
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| ID | 1185855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4702835 |
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| End bp | 4704766 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637395521 |
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| Product | sensor histidine kinase |
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| Protein accession | NP_793936 |
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| Protein GI | 28871317 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGCG ACCCCACTCT TTATCGCGCC GCGCCGCCAT CACTCGCCGT GAAACCCCGT
CTGATTCGCC AGCTGTTTCT GCCACCGTTG ATCCTCATGC TGATGATCGG GCTGGGCTAT
GTCGCCTATC TGGTCAGCGA GCACAATGGC ATCAAGACAC TGCGCGAAAG CGGCGAACGC
CAGCTTGAGC TGCACGCCCG AACGGTCGAG AGCGAAATCA GCAAGTACAC TTACCTGCCT
AGCGTGCTGG AGCTTGAATC CAGCGTGTCA CAATTGCTGA ATGCCCCCAG CCCGGAGGCT
CAGCAGCAAG TCAACCTTTA CCTCGAAGGG ATGAACCGGC GCAGCCGCAG CCGTGCCATC
TACGTGCTGG ACACTACCGG TCGCGTGCTG GCGACCAGCA ACTGGCGCGA CGCCGACAGT
TATCAGGGTG AAGACCTGTC GTTCCGCGCC TATTTCAAGG ATGCGGTGCG CGGTCTGCCG
GGGCGCTTTT ACGGGATCGG CACCACCACC GGCGAGTCGG GCTACTACCT GGCTCACGGG
CTGGAGGAAA AAGGCCGAAT CATTGGTGTT GCGGTCATCA AGGTACGCCT TGAAGCACTG
GAAGAGCGCT GGCAGCGGGC GCGCCTGGAA GCCTTTGTCA GCGACGAGAA CGGTATCATC
ATTCTCTCCA GTGACCCGGC ACGACGCCTG AAGTCGGTGC GCCCGCTCAC GCCGGACGTC
AAGGAGCGAC TGGCGCGCAG CCTGCAATAC TACTGGTGGC CACTCAATGA GCTGGTGCCG
CTTGAACGGG AAGTCCTGTC AGAAGGTGTC GAGAAACTTG TTTTCCCGGC CAATGTCAGT
GTCGATCGGG AGCACAAGCA GGTCAGTTAT CTGGCCCAGA CCCGCGCGTT GAGCGACACC
TCCTGGCACC TGACACTGCT GACCCCGCTT GAGGACCTGC GCCGCGAGGC TGCAAACCAG
GGCATGCTGG TGGCGGTGGC CTGCGCACTG GTGACCTTTC TGCTGATCGC CTGGAATGAA
CGGCGCAAAG TCATCTCGAC CCGGCTGGCC GCCAGAGAAG CGCTGCAGGC TGCCAATGAT
GAGCTGGAAC GCAAGATTAC CGAGCGCACC GAACACCTGC GCGCCAGCAA CGAACGCCTC
AAGGCGCAGA TTCGCGAGCG AAGGCTGGCG GAAGAAACCC TGCGCACCGC TCAGGACGAG
CTGGTACAGG CCGGTAAACT GGCCGCCATC GGGCAGATGT CGACCAGCAT TGCTCATGAA
CTGAATCAGC CACTGGCGGC ACTGCGCACC CTGTCCGGCA ACACCGTAAG GTTTCTGGAG
CGTGGCGCGC TGGACACCGC TAGTGCCAAC CTGCGCACCA TCAATGATCT GGTTGACCGC
ATGGGCCGCA TCACCGCCAG CCTGCGCGCG TTTGCCCGGC GCGGCGATGA TCAGGGCCAG
GCGCAATTGA GCAAGGCAGT GGACGCCGCG TTGCAATTGC TCGGTGTGCG CCTCGAGCAG
TCCGGCCTGA CGCTGCACCG CGATTTTGTC GAGGCCACCC TGACCATTGA TCAGACCCGC
CTTGAGCAGA TTCTGGTCAA CCTGATCGGC AATGCACTGG ACGCCATGTT CACCCAACCG
CAGCCGGAGC TGTGGCTTGA AGGGTCAGTT GTCGACGGTC GCTACCGCTT GCAGGTACGC
GACAACGGTC ACGGCGTCGA TGCCCAAGCA CGCAAGCACC TGTTCGAGCC GTTCTTCACG
ACCAAACCGG GCGAGCAAGG CCTGGGACTG GGCCTGACCC TGTCAGCGAG CCTTGCCGCC
GCAGCCGGGG GCAACCTGAG CGCGGAGCAT CCGGGCGACG GCGGCACTAC CTTTGTCCTG
AGCCTGCCGT TTATTGCGCA TGCCCCGACC GATCCTCGCT CGGGCACCCC TCGCCCGGGC
GGGCCGACAT GA
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| Protein sequence | MKCDPTLYRA APPSLAVKPR LIRQLFLPPL ILMLMIGLGY VAYLVSEHNG IKTLRESGER
QLELHARTVE SEISKYTYLP SVLELESSVS QLLNAPSPEA QQQVNLYLEG MNRRSRSRAI
YVLDTTGRVL ATSNWRDADS YQGEDLSFRA YFKDAVRGLP GRFYGIGTTT GESGYYLAHG
LEEKGRIIGV AVIKVRLEAL EERWQRARLE AFVSDENGII ILSSDPARRL KSVRPLTPDV
KERLARSLQY YWWPLNELVP LEREVLSEGV EKLVFPANVS VDREHKQVSY LAQTRALSDT
SWHLTLLTPL EDLRREAANQ GMLVAVACAL VTFLLIAWNE RRKVISTRLA AREALQAAND
ELERKITERT EHLRASNERL KAQIRERRLA EETLRTAQDE LVQAGKLAAI GQMSTSIAHE
LNQPLAALRT LSGNTVRFLE RGALDTASAN LRTINDLVDR MGRITASLRA FARRGDDQGQ
AQLSKAVDAA LQLLGVRLEQ SGLTLHRDFV EATLTIDQTR LEQILVNLIG NALDAMFTQP
QPELWLEGSV VDGRYRLQVR DNGHGVDAQA RKHLFEPFFT TKPGEQGLGL GLTLSASLAA
AAGGNLSAEH PGDGGTTFVL SLPFIAHAPT DPRSGTPRPG GPT
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