| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4171 |
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| Symbol | |
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| ID | 1185851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4699577 |
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| End bp | 4700503 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637395517 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_793932 |
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| Protein GI | 28871313 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.464629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCG TTCCCCATCT GCTTGGCGCA GCCATTGCTG CCGCTCTGAT CAGCACTCCG
GTTTTCGCCG CCGAACTCAC CGGCACCCTG AAGAAGATCA AAGAATCCGG CACTATCACC
CTCGGCCACC GTGACGCCTC CATCCCGTTT TCCTACATCG CGGATGCCTC TGGCATACCG
ATGGGCTACT CCCATGACAT CCAGCTGAAA ATCGTCGAAG CCATCAAGAA AGAACTCGAC
ATGCCTGACC TCAAGGTCAA GTACAACCTG GTGACGTCCC AGACTCGAAT CCCGCTGGTG
CAGAACGGCA CTGTTGACGT GGAATGTGGT TCGACCACCA ACAACGTCGA GCGTCAGCAG
CAGGTCGATT TCTCCATCGG CATCTTCGAA GTCGGTACAC GCCTGCTGTC CAAGAAAGAC
TCCAGCTACA AGGACTTCGA TGACCTGAAA GGCAAGAACG TCGTGACCAC GGCCGGCACC
ACGTCCGAGC GAATCATCAA GACGATGAAC GCCGACAAGC AGATGGGCAT GAACGTGATC
TCCGCCAAGG ACCACGGTGA GTCGTTCCAG ATGCTTGAAT CCGGCCGTGC AGTCGCTTTC
ATGATGGACG ACGCATTGCT GGCCGGCGAG ATGGCCAAAG CCAAGAAGCC GGATGACTGG
GCTGTGACCG GCACTGCGCA ATCCTACGAA ATCTATGGCT GCATGGTTCG CAAGGGCGAC
GCCCCGTTCA AGAAGGCCGT GGATGACGCC ATTGTCGCCA CCTACAAGTC CGGCGACATC
AATGCCATCT ACAGCAAGTG GTTCATGTCG CCAGTCCCGC CTAAAGGGCT GAATCTGAAT
TTCCCGATGA GCGCCGAACT CAAGAAGCTG ATCGAGAACC CCACCGACAA AGCTGCTGAC
GACAAAGCTG AAGACAAGAA AGCCTGA
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| Protein sequence | MRIVPHLLGA AIAAALISTP VFAAELTGTL KKIKESGTIT LGHRDASIPF SYIADASGIP
MGYSHDIQLK IVEAIKKELD MPDLKVKYNL VTSQTRIPLV QNGTVDVECG STTNNVERQQ
QVDFSIGIFE VGTRLLSKKD SSYKDFDDLK GKNVVTTAGT TSERIIKTMN ADKQMGMNVI
SAKDHGESFQ MLESGRAVAF MMDDALLAGE MAKAKKPDDW AVTGTAQSYE IYGCMVRKGD
APFKKAVDDA IVATYKSGDI NAIYSKWFMS PVPPKGLNLN FPMSAELKKL IENPTDKAAD
DKAEDKKA
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