| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4170 |
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| Symbol | glpD |
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| ID | 1185850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4697683 |
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| End bp | 4699221 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395516 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | NP_793931 |
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| Protein GI | 28871312 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.631546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCACA CTACTGTGCC AACCCCGCCC CTCTCCGAGG TTTACGACAT TGCCGTTATT
GGCGGTGGCA TCAATGGTGT CGGCATTGCG GCAGACGCCT CCGGTCGCGG CCTTTCGGTT
TTCCTGTGCG AAAAAGACGA CCTGGCCAGC CACACGTCCT CAGCCAGCAG CAAGCTGATC
CACGGTGGCC TGCGCTATCT GGAGCATTAC GAATTCCGCC TGGTGCGTGA AGCGCTTGCA
GAGCGTGAAG TGCTGCTTGC CAAGGCTCCG CATATTGTCA AGCCGATGCG CTTTGTCCTG
CCGCACCGTC CGCACCTGCG TCCAGCCTGG ATGATTCGCG CCGGGATGTT TCTGTACGAC
AACCTCGGCA AGCGCGAAAA GCTGCCCGCC TCACGGACCA TTCGCTTCGG TGCCGACAGC
CCGCTCAATT CGAGCATCAC CCGCGGCTTC GAGTACTCCG ATTGCTGGGT CGACGATGCC
CGCCTGGTGG TACTCAACGC GATGGCCGCC CGTGAAAACG GCGCGCACAT CCACACGCAA
ACCCGCTGTG TCAGCGCCCG CCGTATCAAA GGCATGTGGC ACCTGCACCT GGAACGCAGC
GACGGCAGCC TGTTTTCGAT CCATGCCAAG GCGCTGGTCA ATGCGGCAGG ACCGTGGGTG
GCCAAGTTCA TTCGTGAAGA CCTCAAGCTC GATTCGGCTT ACGGCATTCG CTTGATCCAG
GGCAGCCACC TGATCGTGCC GAAGCTGTAC GAAGGTGAAC ACGCGTTCAT TCTGCAGAAT
GAAGACAAGC GTATCGTGTT CACCATCCCG TACCTGGAGC ACTTCACGAT CGTCGGCACC
ACCGACCGCG AATATCAGGG CGACCCGAAC AAGGTCGACA TCACAGAAGG CGAAATGGAT
TACGTGCTGA AGGTGGCCAA CGATCACTTC AAGAAGCAGC TTAACCGTAC AGACGTGCTC
CATACCTTCT CCGGCGTACG TCCGCTGTGT AACGACGAGT CTGATAATCC ATCGGCCATC
ACTCGCGACT ACACGCTGTC GTTGTCGGGC AGTGGCGATG AGGCGCCGAT CCTGTCGGTT
TTCGGTGGCA AGCTCACCAC TTACCGCAAG CTGGCCGAGT CGGCGATGGC GCAACTCGCG
CCGTTCTTCA AGCAGATGAA ACCGAGCTGG ACGGCCAAGG CTGCCTTGCC TGGCGGCGAA
GACATGACCT CGCCGCAAGC CCTGGCAGCA GAAATGACCC GTCGCTACAG CTGGCTGCCT
GCGCCTATCG CCAAACGCTG GTCGATCACC TATGGCAGCC GTAGCTGGCG CTTGCTGGAA
GGCGCGCACA GCCTGGAAGA CCTCGGTCAG CATTTGGGTG CCGGGCTGTA CACCCGCGAG
GTTGATTACC TGTGCGATCA GGAATGGGCC ACGGACATCA AAGACATCCT CTGGCGCCGC
ACCAAGCTTG GCCTGTTTAC CACGCCTGAA GAACAGGCTG CGGTCAGCAG CTATATGGAC
ACCGTCGCAC GCAACAAGGC CACTATCGAA GCGGCCTGA
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| Protein sequence | MPHTTVPTPP LSEVYDIAVI GGGINGVGIA ADASGRGLSV FLCEKDDLAS HTSSASSKLI
HGGLRYLEHY EFRLVREALA EREVLLAKAP HIVKPMRFVL PHRPHLRPAW MIRAGMFLYD
NLGKREKLPA SRTIRFGADS PLNSSITRGF EYSDCWVDDA RLVVLNAMAA RENGAHIHTQ
TRCVSARRIK GMWHLHLERS DGSLFSIHAK ALVNAAGPWV AKFIREDLKL DSAYGIRLIQ
GSHLIVPKLY EGEHAFILQN EDKRIVFTIP YLEHFTIVGT TDREYQGDPN KVDITEGEMD
YVLKVANDHF KKQLNRTDVL HTFSGVRPLC NDESDNPSAI TRDYTLSLSG SGDEAPILSV
FGGKLTTYRK LAESAMAQLA PFFKQMKPSW TAKAALPGGE DMTSPQALAA EMTRRYSWLP
APIAKRWSIT YGSRSWRLLE GAHSLEDLGQ HLGAGLYTRE VDYLCDQEWA TDIKDILWRR
TKLGLFTTPE EQAAVSSYMD TVARNKATIE AA
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