| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4169 |
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| Symbol | glpR |
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| ID | 1185849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4696336 |
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| End bp | 4697091 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395515 |
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| Product | glycerol-3-phosphate regulon repressor |
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| Protein accession | NP_793930 |
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| Protein GI | 28871311 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCTGC CTCCCCGCCA ACAACAGATC CTCGAACTGG TCCGTGACCG TGGCTACGTC
AGTATCGAGG AAATGGCGAC CCTGTTCGTC GTGACCCCAC AGACCATCCG CCGCGATATC
AATCAGCTGG CGGAAATGAA CCTGCTGCGT CGCTACCACG GTGGCGCGGC CTATGACTCC
AGCATCGAAA ACACCGCCTA CGCAATGCGT GCGGATCAGA TGCGTGACGA AAAACAACGG
ATCGCCGAGG CCATCGCCGC GCAGATCCCC GACAACGCCT CGCTGTTCAT CAATATCGGT
ACCACCACCG AATCCATCGC GCGTGCCTTG CTCAACCACA ACAATCTTAA AGTCATCACC
AACAACCTGC ATGTGGCGGC GATCCTCAGT GCCAAGGATG ATTTCGAGGT CCTGATCGCA
GGCGGCAATG TGCGCCGTGA TGGCGGTGTC GTGGGTCAGG GCAGTATCGA CTTCATCAGC
CAGTTCAAGG TGGACTTCGC GCTGGTCGGC ATCAGCGGCA TCGATGAGGA CGGTAGCCTG
CTGGATTTTG ATTACCAGGA AGTGCGGGTT TCCCAGTCGA TCATTGCCAA TGCACGCAAG
GTGCTACTGG CGGCTGACTC CAGCAAGTTC GGGCGCAACG CGATGGTACG TCTGGGGCCG
ATCACCCTGA TCGATTGCCT TGTCACCGAC CAGCCGCCGG TGCCGGCACT GCAGCAATTG
TTGATTCAGC ACAAGATTCG TCTGGAAGTG GTCTGA
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| Protein sequence | MNLPPRQQQI LELVRDRGYV SIEEMATLFV VTPQTIRRDI NQLAEMNLLR RYHGGAAYDS
SIENTAYAMR ADQMRDEKQR IAEAIAAQIP DNASLFINIG TTTESIARAL LNHNNLKVIT
NNLHVAAILS AKDDFEVLIA GGNVRRDGGV VGQGSIDFIS QFKVDFALVG ISGIDEDGSL
LDFDYQEVRV SQSIIANARK VLLAADSSKF GRNAMVRLGP ITLIDCLVTD QPPVPALQQL
LIQHKIRLEV V
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