| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4168 |
|---|
| Symbol | glpK |
|---|
| ID | 1185848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4694720 |
|---|
| End bp | 4696225 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637395514 |
|---|
| Product | glycerol kinase |
|---|
| Protein accession | NP_793929 |
|---|
| Protein GI | 28871310 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0554] Glycerol kinase |
|---|
| TIGRFAM ID | [TIGR01311] glycerol kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACA CACAGAACAA GAACTACATC ATTGCTCTTG ACCAGGGCAC CACCAGCTCG
CGCGCCATCA TCTTCGACCG CGACGCCAAT GTGGTGAGCA CGGCCCAAAG CGAATTCGTG
CAGCATTATC CGCAGGCAGG CTGGGTCGAG CATGACCCGA TGGAAATCTT CGCCACGCAG
ACAGCGTGCA TGACCAAGGC GCTGGCGCAG GCTGATCTGC ACCACGATCA GATCGCCGCC
ATCGGTATCA CCAACCAGCG TGAAACCACC GTCATCTGGG AACGCGACAC CGGCCGCCCT
ATCTACAATG CGATCGTCTG GCAGTGCCGC CGCAGCACCG AAATCTGTCA GCAGCTCAAG
CGTGACGGCC TTGAGGAGTA CATCAAGGAC ACCACAGGCC TGGTGCTTGA TCCGTACTTC
TCCGGCTCCA AGGTCAAGTG GATTCTGGAC CACGTCGAAG GCAGCCGCGA GCGCGCGCGT
AAAGGCGAGC TGATGTTCGG CACCATCGAT ACCTGGCTGA TCTGGAAATT CACTGGCGGC
AAGGTTCACG TCACCGACTA CACCAACGCC TCGCGGACCA TGCTGTTCAA CATCCACACG
CTGGAATGGG ATCAGCGCAT GCTTGATGTG CTGGACATCC CGCGCGAGAT CCTGCCTGAG
GTCAAAAGCT CTTCCGAGGT CTACGGTCAC AGCAAGAGCG GCATCCCGAT TGCCGGTATT
GCAGGCGACC AGCAGGCAGC GCTATTCGGC CAGATGTGCG TCGAACCCGG CCAGGCCAAA
AACACCTACG GCACCGGCTG CTTCCTGCTG ATGAACACCG GCAAAAAAGC CGTGAAGTCT
GCGCATGGCA TGCTGACCAC GATTGGCTGC GGCCCACGCG GCGAAGTGGC TTACGCACTC
GAAGGCGCCG TATTCAACGG CGGTTCGACC GTGCAGTGGC TGCGTGACGA ACTGAAGCTG
ATCAACGACG CGCTGGACAC CGAGTACTTC GCCGGCAAGG TCAAGGACAG CAACGGCGTG
TACCTGGTGC CTGCCTTCAC CGGTCTCGGC GCGCCCTACT GGGACCCGTA TGCCCGCGGC
GCACTGTTCG GCCTGACCCG TGGCGTGAAG GTTGATCACA TCATCCGCGC GGCGCTGGAA
TCCATCGCCT ATCAGACCCG TGACGTGCTC GACGCGATGC AGCAGGACTC GGGCGAGCGC
CTCAAGTCGC TGCGCGTGGA TGGCGGCGCG GTCGCCAACA ACTTCCTGAT GCAGTTCCAG
GCAGACATTC TCGGCACTCA TGTCGAGCGC CCGCAAATGC GTGAAACAAC GGCACTGGGC
GCAGCGTTCC TGGCAGGTCT GGCGATTGGT TTCTGGAGCA GCCTGGACGA GTTGCGCAAC
AAGGCTGTGA TCGAGCGCGT GTTCGAGCCT GCTTGCGAAG AGGCGCATCG CGAGAAGCTG
TACGCAGGCT GGCAAAAAGC CGTCGCGCGC ACCCGTGACT GGGAACCGCA CGAAAACGAA
GAGTGA
|
|---|
| Protein sequence | MTDTQNKNYI IALDQGTTSS RAIIFDRDAN VVSTAQSEFV QHYPQAGWVE HDPMEIFATQ
TACMTKALAQ ADLHHDQIAA IGITNQRETT VIWERDTGRP IYNAIVWQCR RSTEICQQLK
RDGLEEYIKD TTGLVLDPYF SGSKVKWILD HVEGSRERAR KGELMFGTID TWLIWKFTGG
KVHVTDYTNA SRTMLFNIHT LEWDQRMLDV LDIPREILPE VKSSSEVYGH SKSGIPIAGI
AGDQQAALFG QMCVEPGQAK NTYGTGCFLL MNTGKKAVKS AHGMLTTIGC GPRGEVAYAL
EGAVFNGGST VQWLRDELKL INDALDTEYF AGKVKDSNGV YLVPAFTGLG APYWDPYARG
ALFGLTRGVK VDHIIRAALE SIAYQTRDVL DAMQQDSGER LKSLRVDGGA VANNFLMQFQ
ADILGTHVER PQMRETTALG AAFLAGLAIG FWSSLDELRN KAVIERVFEP ACEEAHREKL
YAGWQKAVAR TRDWEPHENE E
|
|---|
| |