| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4167 |
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| Symbol | glpF |
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| ID | 1185847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4693833 |
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| End bp | 4694690 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637395513 |
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| Product | glycerol uptake facilitator protein |
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| Protein accession | NP_793928 |
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| Protein GI | 28871309 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATCG CACTAAAACA ACCGACACTC ACCGGGCAAT GTGTGGCCGA GTTTCTTGGC
ACCGCCCTGA TGATTTTTTT TGGCACAGGG TGCGTTGCAG CGCTCAAGGT CGCGGGGGCC
ACTTTCGGCT TGTGGGAAAT CTGCATCATC TGGGGCATGG CCGTCAGCAT GGGGATCTAC
CTCAGCGCGG GCATTTCCGG CGCCCACCTC AACCCGGCCG TCAGCATTGC GCTAAGCCTG
TTTGCCGGTT TCGAAAAACG TAAACTGCCG TTTTACATCT CTGCACAGAT CGCCGGCGCG
TTCTGCGGAG CGGGCCTTGT GTACCTGTTG TACATCAGCC TCTTTTTCGA CTTCGAACAT
GCGCATCACA TCATCCGCGG CAGCGAGCAG AGCCTTGAAC TCGCCTCGGT GTTCTCGACT
TACCCTAACC CGGCCATTTC CGTGGGTCAG GCGTTTCTGG TCGAAGTGGT CATCACCACC
ATTCTGATGG GCGTGATCAT GGCCTTGGGC GATGACAACA ATGGCTTGCC GCGCGGTGCA
TTGGCACCTT TGCTGATCGG CCTGCTGGTT GCCGTTATCG GCAGCGCAAT GGGCCCGCTG
ACCGGTTTTG CCATGAACCC GGCACGTGAC TTTGGTCCAA AGCTGATGAC GTTCTTCGCT
GGCTGGGGTG AAATAGCCTT CACCGGTGGT CGCGACATTC CTTATTTTCT GGTTCCGATT
TTTGCGCCCA TTCTGGGTGC CTGCCTGGGT GCTGCCGGCT ATCGCGCGCT GATTGCGCGT
CATCTGCCGA GCACCGTTAC TGTTGAAAAC GAAAAAGAAG CTCCAGTGGT TCGCGGCAAA
GTTCAGGCTT CATCTTGA
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| Protein sequence | MTIALKQPTL TGQCVAEFLG TALMIFFGTG CVAALKVAGA TFGLWEICII WGMAVSMGIY
LSAGISGAHL NPAVSIALSL FAGFEKRKLP FYISAQIAGA FCGAGLVYLL YISLFFDFEH
AHHIIRGSEQ SLELASVFST YPNPAISVGQ AFLVEVVITT ILMGVIMALG DDNNGLPRGA
LAPLLIGLLV AVIGSAMGPL TGFAMNPARD FGPKLMTFFA GWGEIAFTGG RDIPYFLVPI
FAPILGACLG AAGYRALIAR HLPSTVTVEN EKEAPVVRGK VQASS
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