| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4158 |
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| Symbol | rnt |
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| ID | 1185838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4685766 |
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| End bp | 4686443 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637395504 |
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| Product | ribonuclease T |
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| Protein accession | NP_793919 |
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| Protein GI | 28871300 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR01298] ribonuclease T |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGAAG ATCATTTTGA CGAAGAACAC GAAGGCCACG GCGGTGGCGG CGGTTCCCGT
CACCCGATGG CAGCACGCTT TCGCGGCTAC CTGCCCGTGG TCGTCGATGT AGAAACAGGC
GGTTTCAATT CCGCCACCGA CGCCCTGCTG GAGATCGCTG CGGTGACCAT CGGCATGGAC
GAACGAGGCT TCGTGTTCCC TGAACACACC TATTTCTTCC GCGTCGAGCC CTTCGTGGGC
GCCAATATTG AAGCCGCCGC GCTGGAGTTC ACCGGCATCA AGCTTGACCA CCCGCTGCGC
ATGGCGGTCA GCGAAGAAAC CGCAATGAAC GATATCTTCC GTGGCGTGCG CAAGGCCCTC
AAGGCCAACG GCTGCAAACG CGCCGTGCTG GTCGGCCACA ACGCCAGCTT CGACCTGGGC
TTCGTCAACG CCGCCGTCGC GCGAATGGAC ATGAAGCGCA ACCCGTTTCA CCCTTTCTCA
AGCTTCGACA CCGCTACCCT CGCAGGCCTG GCCTACGGTC AGACCGTGCT GGCCAAGGCC
TGCCAGGCCG CCGGGATCGA CTTCGACGGC CGCGAAGCCC ACTCGGCCCG CTACGACACC
GAAAAGACCG CCGAGCTGTT CTGCGGCATC GTCAACCGCT GGAAAGAGAT GGGCGGCTGG
GAAGACTTCG ACGATTGA
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| Protein sequence | MSEDHFDEEH EGHGGGGGSR HPMAARFRGY LPVVVDVETG GFNSATDALL EIAAVTIGMD
ERGFVFPEHT YFFRVEPFVG ANIEAAALEF TGIKLDHPLR MAVSEETAMN DIFRGVRKAL
KANGCKRAVL VGHNASFDLG FVNAAVARMD MKRNPFHPFS SFDTATLAGL AYGQTVLAKA
CQAAGIDFDG REAHSARYDT EKTAELFCGI VNRWKEMGGW EDFDD
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