Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4148 |
Symbol | |
ID | 1185828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4676089 |
End bp | 4676964 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395494 |
Product | iron-sulfur cluster-binding protein |
Protein accession | NP_793909 |
Protein GI | 28871290 |
COG category | [C] Energy production and conversion |
COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAT TGATTCGCTT GCTTCCCGAC GTGGACCTGA TCCGGAGTAT CGACGCCCTA TTACCGCAGA CGCAGTGCGG CAAGTGCGGC CACTCCGGCT GCCAGCCCTA CGCCGAGGGC ATTGCGGGTG GCGAGGCCAT CAACAAATGC CCGCCAGGCG GTGACGAAAC CATTATCCAG CTGGCCGAAC TGCTCGCAGT TCCGGTCCTG CCACTGGATA AGGAACGCGG CGAGGCGCCT GCGCAGGTTG CCTTCATTCG CGAAGCAGAG TGCATTGGCT GTACCAAATG CATTCAGGCT TGCCCGGTCG ATGCGATTCT CGGTGCGGCG AAGCTGATGC ACACCGTGAT TATCGATGAA TGCACGGGCT GTGACCTGTG CGTCGCCCCT TGCCCGGTGG ACTGCATTGA AATGCATGCG CTGCCACTGG CCAACGTCAC CCCGATTGTT GGCGGCCTGG CACCTACTGC CGACCTGCAA CACGCTCGCC TGCGCAAGCG CAGCCATGCC CGACAGCGCT TTGAGTCACG CAATGCACGC TTGCGACGCG AGCAGCAGAT GCGACTGGCA GAACGTCTTG CCAGGGCGCA GAGAGCCGAA TCCATTCGTG ACGCCGCACC TCAATCTGCC ACGACGTCCG TGCGAAGCGA CAAGCCCGCA CCACCCGATG AAGCGCTGAA AAAAGCCAGG ATTGCGCTGG CCATGAGTCG CGCGCAGCTC AACAAGTCGC TAAAGGCTTT TGGACACCCT CCGGTTGCGG AGCAGGCTGC CAGGCTTCTA GAGCTACAGC GCGAATACGA AGCCGCCGAA CAGGCACTCG AAGCCCTCCT GCCGACGCCC ACTCTGACCG ATCCCGAGGA AACGCTCCTT CCATGA
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Protein sequence | MTELIRLLPD VDLIRSIDAL LPQTQCGKCG HSGCQPYAEG IAGGEAINKC PPGGDETIIQ LAELLAVPVL PLDKERGEAP AQVAFIREAE CIGCTKCIQA CPVDAILGAA KLMHTVIIDE CTGCDLCVAP CPVDCIEMHA LPLANVTPIV GGLAPTADLQ HARLRKRSHA RQRFESRNAR LRREQQMRLA ERLARAQRAE SIRDAAPQSA TTSVRSDKPA PPDEALKKAR IALAMSRAQL NKSLKAFGHP PVAEQAARLL ELQREYEAAE QALEALLPTP TLTDPEETLL P
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