| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4145 |
|---|
| Symbol | capB |
|---|
| ID | 1185825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4672279 |
|---|
| End bp | 4672488 |
|---|
| Gene Length | 210 bp |
|---|
| Protein Length | 69 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637395491 |
|---|
| Product | cold shock protein CapB |
|---|
| Protein accession | NP_793906 |
|---|
| Protein GI | 28871287 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATC GCCAAACTGG TACCGTTAAG TGGTTCAACG ATGAAAAAGG CTTCGGCTTC
ATCACTCCAC AATCCGGTGA CGACCTGTTC GTGCACTTCA AAGCTATCCA ATCCGACGGC
TTCAAAAGCC TGAAAGAAGG CCAACAGGTT TCTTTCATCG CTACCCGCGG TCAGAAAGGC
ATGCAAGCTG AAGAAGTTCA AGTTATCTAA
|
|---|
| Protein sequence | MSNRQTGTVK WFNDEKGFGF ITPQSGDDLF VHFKAIQSDG FKSLKEGQQV SFIATRGQKG
MQAEEVQVI
|
|---|
| |