| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4138 |
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| Symbol | |
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| ID | 1185818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4664824 |
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| End bp | 4665534 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395484 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_793899 |
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| Protein GI | 28871280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGAGT TGTTACAGGA ATACTGGAAA CCCTTCCTTT ATACAGACGG CGTGAATATC
ACCGGTCTGG CCATGACGAT GTGGCTGCTC AGCGCCTCGA TTGCCATCGG CTTCTGCGTG
TCGATCCCGC TGTCGATTGC GCGGGTGTCG AGAAATCGCT GGGTGCGCTG GCCCGTGCAG
TTCTACACCT ACCTGTTTCG CGGCACACCG CTCTATATAC AGCTGCTGAT TTGCTACACC
GGCATTTACA GCATTGCTGC CGTGCGCGAG CAACCGATGC TGGATGCGTT CTTTCGCGAC
GCGATGAACT GCACGATCTT GGCCTTCACC CTGAACACCT GCGCGTACAC CACGGAAATT
TTTGCCGGTG CCATCCGCAG CATGGCCCAC GGCGAAGTCG AAGCGGCCAA AGCCTACGGC
CTGACCGGCT GGAAGCTTTA TGCCTACGTG ATCATGCCAT CAGTGCTACG CCGTTCGCTG
CCGTACTACA GCAACGAAGT GATCCTGATG CTGCACTCGA CCACGGTAGC CTTCACCGCC
ACCGTGCCAG ACATCTTGAA AGTGGCGCGG GATGCCAACT CCGCGACGTT CATGACCTTC
CAGTCCTTCG GTATCGCCGC CGTCATGTAC CTGACCGTTA CGTTCATTCT GGTCGGGCTG
TTCCGTCTTG CCGAACGCCG CTGGCTGGCC TTTCTCGGCC CGGCTCATTA A
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| Protein sequence | MIELLQEYWK PFLYTDGVNI TGLAMTMWLL SASIAIGFCV SIPLSIARVS RNRWVRWPVQ
FYTYLFRGTP LYIQLLICYT GIYSIAAVRE QPMLDAFFRD AMNCTILAFT LNTCAYTTEI
FAGAIRSMAH GEVEAAKAYG LTGWKLYAYV IMPSVLRRSL PYYSNEVILM LHSTTVAFTA
TVPDILKVAR DANSATFMTF QSFGIAAVMY LTVTFILVGL FRLAERRWLA FLGPAH
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