| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4136 |
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| Symbol | |
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| ID | 1185816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4663235 |
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| End bp | 4664017 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637395482 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_793897 |
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| Protein GI | 28871278 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.502518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CATGGCTGAC TCTTTCCGCA CTGGCTCTGT GCATCGCCGC CGGTAATACG
ATGGCCAAGG AATACAAGGA ACTGCGCTTC GGCGTCGATC CATCCTATGC ACCGTTTGAA
TCCAAAGCCG CCGACGGCAG CCTGGTGGGT TTCGATATCG ACTTGGGCAA CGCGATCTGC
AAAGAGCTGA AAGTCACCTG CAAATGGGTT GAAAGCGATT TCGACGGCAT GATCCCCGGC
CTCAAGGCGC GTAAATTCGA CGGCGTGATC TCCTCGATGA CCGTGACCCC GGCTCGCGAA
AAAGTCATCG ACTTCTCCAA CGAGCTGTTC TCCGGCCCGA CGTCGCTGGT GTTCAAGAAA
GGTGCAGGCT TTACCGCTGA CCCGGCCAGC CTGAAAGGCA AGACCGTGGG CTACGAGCAA
GGCACCATCC AGGAAGCCTA CGCCAAGGCC GTGCTGGACA AGTCCGGCGT GACCACCAAG
GCCTACGCCA ACCAGGATCA GGTTTACGCC GACCTGACCT CCGGTCGTCT GGACGCCTCG
ATCCAGGACA TGCTGCAAGC CGAACTGGGC TTCCTGAAAT CGCCAGCCGG TGCCGACTAC
GAAGTCAGCA AGCCTATCGA CAGCGAACTG CTGCCAGCGA AAACCGCCAT CGGTATCGCG
CAGGGCAACA AAGAGCTGAA AGCGCTGCTG GATAAAGGCA TCAAGGCCAT GCACGATGAC
GGCACCTACG CTGAAATCCA GAAAAAACAC TTTGGCGACC TGAACCTGTA CAGCGGCAAA
TAA
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| Protein sequence | MKKAWLTLSA LALCIAAGNT MAKEYKELRF GVDPSYAPFE SKAADGSLVG FDIDLGNAIC
KELKVTCKWV ESDFDGMIPG LKARKFDGVI SSMTVTPARE KVIDFSNELF SGPTSLVFKK
GAGFTADPAS LKGKTVGYEQ GTIQEAYAKA VLDKSGVTTK AYANQDQVYA DLTSGRLDAS
IQDMLQAELG FLKSPAGADY EVSKPIDSEL LPAKTAIGIA QGNKELKALL DKGIKAMHDD
GTYAEIQKKH FGDLNLYSGK
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