Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4133 |
Symbol | |
ID | 1185813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4657254 |
End bp | 4659728 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395479 |
Product | penicillin amidase family protein |
Protein accession | NP_793894 |
Protein GI | 28871275 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.699184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCTCGC CAGCCCTTCG TCATTTTCTA CCCCGATTCG GCGCTGCCGC TGCTGCGGCA AGCTTCCTGA GCCTTGCTGG CTGCCAGCTG GGCGGCGGTG ATCCCGAGAC TGTGCTGCCT GCTTCCGGGA CCTTCCCGCT CAAAGGCCTG GCGCAGAATG TGTCGGTGCG CCGCAACAAC ATGGGCATGC CGCTCATAGA AAGCAGCACG TACCACGACG CGCTGTTCAC GCTGGGTTAC GTGCACGCCG GTGATCGCAT CGGTCAGATG CTCGGCATGC GCCTGCTGGC GCAGGGCCGT TTGTCGGAAG TGGCCGGGGC GGACGCGCTG GAAGTCGACC GCCTGATGCG CTCTGTGAAC CTCAAGCGGA ACGCCAGCGA CCTGTACAAC GCCGCTTCAC CGCGCCTCAA ACGCTTCTTC GATGTCTATG CAAGGGGCGT CAACGCCTAC CTGTTCCGCT ACCGCGACAA GCTACCGGCA GATGTCGCCC GCGCAGGTTA CACGCCTGAG TACTGGAAGC CGGAAGACTC GGCGCTGATT TTCAGCCTGC TCAACTTCAG CCTGTCGGTG AACCTGCAGG AAGAACTGTC CGCGCTGGTG CTGGCGCAGA AAGTGGGGGC AGACAAACTC GCCTGGCTGC TGCCGACTTA CCCTGACGAA GAGCTGCCGT TTGCCGAAGC CGACAAGCTC AAGGGCCTCA ATTTGAGCAA TCAGGTCACC GGCCTGAGCG ATCTGAACAG GATCGCCTTG CAGCTCTCGG ACCTGAACAT GCTCGGCGTC GCCGCTTCAA GCAACTGGGC GATTGCGCCG CAGCGTAGCC GTAGTGGTAA AAGCCTGCTG GCCAGCGACA TGCAATTGCC CGCCGGGCTC AACTCTGCGT GGAGCTTCGT GCAGATCCGT GCACCGAAAT ATCAGGTGTC CGGGGCGTCC ATCGCCGGTC TGCCACTGGT CCTGAGCGGC TTCAACGGCA AGCTGGCGTG GAGCATGAGC AACGTCAAGG GCGACAATCA GGATCTGTTC CTTGAGAAGA TCAAGCGCGA AGGCAACCGC GTCTCTTACA TGGCGGATGG CAAGTGGGTG CCGGCAGCCT CTCACCAGGA AACCTTTCTG GTCAAAGGCG GCAGCCCGAT TCGTGAAACG GTCTACGAGA CGCGTCACGG CGCATTGCTC AATGCCAGCG CAACACCGCC CGGCAATGGC TTGAGCCTGG CGCTGCAAGT GCCCGACTTC AAAGACGACA AGAGCCTGGA TGCGTTCTTT GACCTGTCCC GCGCGCCCAA CGTCGAGAAG GCGTTCGATA CCAGCCGCGA GATCCGTGCG ATCACCCTGA ACATGGTCTT CGCCGATGCC TCGAACATTG GCTGGCAAGT CACAGGGCGC TTCCCGAACC GTCGTGAAGG CCAGGGCCTG CTGCCTTCGC CGGGCTGGGA CGGCAAATAT GACTGGGACG GTTTTGCCGA CTCGATGCTC CATCCTTATG ATCAAGACCC GCGCCAGGGC TGGCTGGCAG CGGCCAACCA GCGCACGATT CCGAAAGGCT ACGGCATGCA GCTTTCCAAC TCGTGGGGCT ACCCGGAGCG CGCCGAGCGT ATCGCCGAGC TGGCCAACAG CGGCAAGCAG GACCTGCGCA GCACCGTCGC CATGCAATAC GACCAGACCA CGACGTTCGC GGCCAAACTC AAGACCATTT TCCAGGCGCC AGGCATGAGC AAGCCGCTCA AGCAGGCCAT CGACGCCCTG CCGGAGGCTG ATCGCAACAA TGCCCGCGAA GCATTCACTC GCCTGATGGC GTTCGATGGC AAGCTCAGCG CCACATCGGC TGATGCTGCG CTGTACGAGC TGTTTCTGCA GGAAAGCGCC AAACAGATTT TCCTCGATGA ACTGGGCCCG GAAACCAGCC CTGCCTGGCA AGCGCTGGTG GCCAATGCCA GCTCGTCGTA TTCGCCGCAA GCAGACCATT TGCTGGGCCG CGATGACAGC CCGTATTGGG ATGACGTCAA AACCCCGCAG AAAGAAGACA AGCCAGCCAT TCTGGCGCGC AGCCTTGCGG CGGCTGTCAC CCGTGGCGAC AGCTTGTTGG GCAGTGATCA CAAAGCCTGG CAATGGGGCA AATTGCATCG CGACAACTGG ACCTCGGCCA ATCCACTGGC CAGGCAGTTG GGCGGCGGCG AGTTCAACCG CAGTGCTTCG GCGGCGGGCG GTGATCACAC CACGCTGAAT GTGTCCGGTT TCGAGTGGGG CAAAGGCTTC GATGCACGCG TGGCACCAAG TCTGCGCATG ATCGTCGATT TCAGCCTTGT CGAGCCCATG ACCGGGATGA TCAACACCGG CCAGTCCGGC AACCCGGCCA GCCCGTACTA CGCCAACAGC ATCGAGCCTT GGCAGAAAGG GCAATACATG TCGATCCCGC TGCAACAGCA GAACTACGAA AAAGGCTACG GCAAACAACG CCTGACGCTG ACGCCGGGCA AGTAA
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Protein sequence | MASPALRHFL PRFGAAAAAA SFLSLAGCQL GGGDPETVLP ASGTFPLKGL AQNVSVRRNN MGMPLIESST YHDALFTLGY VHAGDRIGQM LGMRLLAQGR LSEVAGADAL EVDRLMRSVN LKRNASDLYN AASPRLKRFF DVYARGVNAY LFRYRDKLPA DVARAGYTPE YWKPEDSALI FSLLNFSLSV NLQEELSALV LAQKVGADKL AWLLPTYPDE ELPFAEADKL KGLNLSNQVT GLSDLNRIAL QLSDLNMLGV AASSNWAIAP QRSRSGKSLL ASDMQLPAGL NSAWSFVQIR APKYQVSGAS IAGLPLVLSG FNGKLAWSMS NVKGDNQDLF LEKIKREGNR VSYMADGKWV PAASHQETFL VKGGSPIRET VYETRHGALL NASATPPGNG LSLALQVPDF KDDKSLDAFF DLSRAPNVEK AFDTSREIRA ITLNMVFADA SNIGWQVTGR FPNRREGQGL LPSPGWDGKY DWDGFADSML HPYDQDPRQG WLAAANQRTI PKGYGMQLSN SWGYPERAER IAELANSGKQ DLRSTVAMQY DQTTTFAAKL KTIFQAPGMS KPLKQAIDAL PEADRNNARE AFTRLMAFDG KLSATSADAA LYELFLQESA KQIFLDELGP ETSPAWQALV ANASSSYSPQ ADHLLGRDDS PYWDDVKTPQ KEDKPAILAR SLAAAVTRGD SLLGSDHKAW QWGKLHRDNW TSANPLARQL GGGEFNRSAS AAGGDHTTLN VSGFEWGKGF DARVAPSLRM IVDFSLVEPM TGMINTGQSG NPASPYYANS IEPWQKGQYM SIPLQQQNYE KGYGKQRLTL TPGK
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