Gene PSPTO_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4133 
Symbol 
ID1185813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4657254 
End bp4659728 
Gene Length2475 bp 
Protein Length824 aa 
Translation table11 
GC content62% 
IMG OID637395479 
Productpenicillin amidase family protein 
Protein accessionNP_793894 
Protein GI28871275 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.699184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCGC CAGCCCTTCG TCATTTTCTA CCCCGATTCG GCGCTGCCGC TGCTGCGGCA 
AGCTTCCTGA GCCTTGCTGG CTGCCAGCTG GGCGGCGGTG ATCCCGAGAC TGTGCTGCCT
GCTTCCGGGA CCTTCCCGCT CAAAGGCCTG GCGCAGAATG TGTCGGTGCG CCGCAACAAC
ATGGGCATGC CGCTCATAGA AAGCAGCACG TACCACGACG CGCTGTTCAC GCTGGGTTAC
GTGCACGCCG GTGATCGCAT CGGTCAGATG CTCGGCATGC GCCTGCTGGC GCAGGGCCGT
TTGTCGGAAG TGGCCGGGGC GGACGCGCTG GAAGTCGACC GCCTGATGCG CTCTGTGAAC
CTCAAGCGGA ACGCCAGCGA CCTGTACAAC GCCGCTTCAC CGCGCCTCAA ACGCTTCTTC
GATGTCTATG CAAGGGGCGT CAACGCCTAC CTGTTCCGCT ACCGCGACAA GCTACCGGCA
GATGTCGCCC GCGCAGGTTA CACGCCTGAG TACTGGAAGC CGGAAGACTC GGCGCTGATT
TTCAGCCTGC TCAACTTCAG CCTGTCGGTG AACCTGCAGG AAGAACTGTC CGCGCTGGTG
CTGGCGCAGA AAGTGGGGGC AGACAAACTC GCCTGGCTGC TGCCGACTTA CCCTGACGAA
GAGCTGCCGT TTGCCGAAGC CGACAAGCTC AAGGGCCTCA ATTTGAGCAA TCAGGTCACC
GGCCTGAGCG ATCTGAACAG GATCGCCTTG CAGCTCTCGG ACCTGAACAT GCTCGGCGTC
GCCGCTTCAA GCAACTGGGC GATTGCGCCG CAGCGTAGCC GTAGTGGTAA AAGCCTGCTG
GCCAGCGACA TGCAATTGCC CGCCGGGCTC AACTCTGCGT GGAGCTTCGT GCAGATCCGT
GCACCGAAAT ATCAGGTGTC CGGGGCGTCC ATCGCCGGTC TGCCACTGGT CCTGAGCGGC
TTCAACGGCA AGCTGGCGTG GAGCATGAGC AACGTCAAGG GCGACAATCA GGATCTGTTC
CTTGAGAAGA TCAAGCGCGA AGGCAACCGC GTCTCTTACA TGGCGGATGG CAAGTGGGTG
CCGGCAGCCT CTCACCAGGA AACCTTTCTG GTCAAAGGCG GCAGCCCGAT TCGTGAAACG
GTCTACGAGA CGCGTCACGG CGCATTGCTC AATGCCAGCG CAACACCGCC CGGCAATGGC
TTGAGCCTGG CGCTGCAAGT GCCCGACTTC AAAGACGACA AGAGCCTGGA TGCGTTCTTT
GACCTGTCCC GCGCGCCCAA CGTCGAGAAG GCGTTCGATA CCAGCCGCGA GATCCGTGCG
ATCACCCTGA ACATGGTCTT CGCCGATGCC TCGAACATTG GCTGGCAAGT CACAGGGCGC
TTCCCGAACC GTCGTGAAGG CCAGGGCCTG CTGCCTTCGC CGGGCTGGGA CGGCAAATAT
GACTGGGACG GTTTTGCCGA CTCGATGCTC CATCCTTATG ATCAAGACCC GCGCCAGGGC
TGGCTGGCAG CGGCCAACCA GCGCACGATT CCGAAAGGCT ACGGCATGCA GCTTTCCAAC
TCGTGGGGCT ACCCGGAGCG CGCCGAGCGT ATCGCCGAGC TGGCCAACAG CGGCAAGCAG
GACCTGCGCA GCACCGTCGC CATGCAATAC GACCAGACCA CGACGTTCGC GGCCAAACTC
AAGACCATTT TCCAGGCGCC AGGCATGAGC AAGCCGCTCA AGCAGGCCAT CGACGCCCTG
CCGGAGGCTG ATCGCAACAA TGCCCGCGAA GCATTCACTC GCCTGATGGC GTTCGATGGC
AAGCTCAGCG CCACATCGGC TGATGCTGCG CTGTACGAGC TGTTTCTGCA GGAAAGCGCC
AAACAGATTT TCCTCGATGA ACTGGGCCCG GAAACCAGCC CTGCCTGGCA AGCGCTGGTG
GCCAATGCCA GCTCGTCGTA TTCGCCGCAA GCAGACCATT TGCTGGGCCG CGATGACAGC
CCGTATTGGG ATGACGTCAA AACCCCGCAG AAAGAAGACA AGCCAGCCAT TCTGGCGCGC
AGCCTTGCGG CGGCTGTCAC CCGTGGCGAC AGCTTGTTGG GCAGTGATCA CAAAGCCTGG
CAATGGGGCA AATTGCATCG CGACAACTGG ACCTCGGCCA ATCCACTGGC CAGGCAGTTG
GGCGGCGGCG AGTTCAACCG CAGTGCTTCG GCGGCGGGCG GTGATCACAC CACGCTGAAT
GTGTCCGGTT TCGAGTGGGG CAAAGGCTTC GATGCACGCG TGGCACCAAG TCTGCGCATG
ATCGTCGATT TCAGCCTTGT CGAGCCCATG ACCGGGATGA TCAACACCGG CCAGTCCGGC
AACCCGGCCA GCCCGTACTA CGCCAACAGC ATCGAGCCTT GGCAGAAAGG GCAATACATG
TCGATCCCGC TGCAACAGCA GAACTACGAA AAAGGCTACG GCAAACAACG CCTGACGCTG
ACGCCGGGCA AGTAA
 
Protein sequence
MASPALRHFL PRFGAAAAAA SFLSLAGCQL GGGDPETVLP ASGTFPLKGL AQNVSVRRNN 
MGMPLIESST YHDALFTLGY VHAGDRIGQM LGMRLLAQGR LSEVAGADAL EVDRLMRSVN
LKRNASDLYN AASPRLKRFF DVYARGVNAY LFRYRDKLPA DVARAGYTPE YWKPEDSALI
FSLLNFSLSV NLQEELSALV LAQKVGADKL AWLLPTYPDE ELPFAEADKL KGLNLSNQVT
GLSDLNRIAL QLSDLNMLGV AASSNWAIAP QRSRSGKSLL ASDMQLPAGL NSAWSFVQIR
APKYQVSGAS IAGLPLVLSG FNGKLAWSMS NVKGDNQDLF LEKIKREGNR VSYMADGKWV
PAASHQETFL VKGGSPIRET VYETRHGALL NASATPPGNG LSLALQVPDF KDDKSLDAFF
DLSRAPNVEK AFDTSREIRA ITLNMVFADA SNIGWQVTGR FPNRREGQGL LPSPGWDGKY
DWDGFADSML HPYDQDPRQG WLAAANQRTI PKGYGMQLSN SWGYPERAER IAELANSGKQ
DLRSTVAMQY DQTTTFAAKL KTIFQAPGMS KPLKQAIDAL PEADRNNARE AFTRLMAFDG
KLSATSADAA LYELFLQESA KQIFLDELGP ETSPAWQALV ANASSSYSPQ ADHLLGRDDS
PYWDDVKTPQ KEDKPAILAR SLAAAVTRGD SLLGSDHKAW QWGKLHRDNW TSANPLARQL
GGGEFNRSAS AAGGDHTTLN VSGFEWGKGF DARVAPSLRM IVDFSLVEPM TGMINTGQSG
NPASPYYANS IEPWQKGQYM SIPLQQQNYE KGYGKQRLTL TPGK