| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4120 |
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| Symbol | |
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| ID | 1185800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4643754 |
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| End bp | 4645898 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637395466 |
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| Product | ATP-dependent helicase, DinG family |
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| Protein accession | NP_793881 |
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| Protein GI | 28871262 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGTA CCGAACTCAA AACCCAGATC CAGGGCGCTT ACTCGCGTTT CCTCGAAGCC
AAGAGCCTCA AACCGCGCTA TGGCCAGCGA TTGATGATCG CTGAAGTCGC CAAGGTGCTG
GGGGACATTG ATACCGATGA AGAGGGGCGT CGTTCGGGCG ACCCTGCAGT CGTGGCTGTC
GAGGCCGGGA CGGGCACCGG CAAGACCGTG GCCTACGCCA TCGCCGCAAT TCCCACTGCC
AAAGCGGCGG GCAAACGGCT GGTGATTGCC ACGGCAACCG TCGCGCTGCA GGAGCAGATC
GTCTACAAGG ACCTGCCGGA CCTGATGCGC AACAGCGGTC TGAACTTCAC CTTCTCGTTG
GCCAAGGGGC GAGGCCGTTA CATGTGCCTG TCCAAACTCG ACGCATTGCT GCAGGAGAGT
GACGCGACCA ACGCGACCGC GCAGCTGTTC GAGGAAGAAG GCTTCAAGAT CGAGGTCGAT
GAAGCCAGCC AGAAGCTGTT CACCAGCATG TTGCAGAAGC TGGCGGGCAA CAAATGGGAC
GGTGACCGCG ACAGTTGGCC ACAGGAACTC GCCGACCAGG ACTGGGCGCG GCTGACCACC
GATCACAGCC AATGCACCAA CCGTCATTGC CCCAACTTCC AGCAGTGCGC CTTCTATAAA
GCGCGCGAAG GCATGGGCAA GGTTGACGTG ATCGTCACCA ACCACGACAT GGTGCTGGCT
GACCTCGCGC TGGGCGGCGG CGCAGTATTG CCAGACCCGC GTGACACGCT GTACGTGTTC
GACGAAGGCC ATCACTTGCC CGACAAGGCC ATCGGCCACT TTGCCCATTA CACCCGCTTG
AAATCCACCG CCGACTGGCT GGAGCAGACC GCCAAGAACC TCGCCAAGCT GCTGGCCCAG
CACCCCTTGC CTGGCGACCT GGGCAAGCTG ATCGAGCAAG TGCCGGAGCT GGCCCGCGAG
ATCAAGGGCC ATCAGCAGTT CATGTTCGGC GCCTGCGAGC AACTGGCGGA TTTCCGCGCC
GGTGAAGACA TGCAAGGCCG TGAACGGCCT CGGCATCGCT TTATCGGTGG CGTGATCCCC
GAGCACATCC GCGAGATGGG CATCGAACTG AAAAAGGGTT TCGCCCGTCT GGATGATCTG
TTCACGCGCC TGACTGAACT GCTTAAAGAA GGCATGGACG GCGAGGTCAA CATCGGCATC
GCCAGCCATC AGGCTGAAGA GTGGTATCCG TTGTTCGGCA GCCTGCTGGC CCGGGCCCAC
GGCAACTGGG AGCTGTGGAC GGCGTTCACC GCCGAAGACC CGGAAGACAG CCCGCCGATG
GCACGCTGGC TGACCCTGGC CGACAGCGGC GCATTGTTCG ATATCGAGGT CAACGCCAGC
CCGATTCTGG CTGCCGAGAT GCTGCGCCGT AACCTGTGGA ACATCGCCTA TGGTGCGCTC
GTGACCTCGG CCACCCTGAC CGCACTGGGC AAGTTCGACC GTTACCGCAT GCGTGCCGGC
CTGCCTAAAG GTGCCGTGAC GGCGGTGGTG CCCAGCCCGT TCCACCACGC CGACGCTGGG
GTGTTGCGGG TGCCGGACCT CAAGGCCGAC CCGCGTGACT CGGTGGCCCA TACCGCTGCG
ATCATTCGTG ACCTGCCCGG TCTGGTCGAA GGTTCGCGAG GCACGCTGGT GCTGTATTCG
TCGCGCAAGC AGATGCAGGA CGTTTTCGAT GGCCTGGACC GCGACTGGCG CAAGCAAGTG
TTCATTCAGG GCAATCTGTC CAAACAGGAG ACGCTGAACA AGCACAAGGC ACGGGTCGAC
AGTGGCGAAT CCAGCGTGCT GTTCGGGCTG GCCAGCTTTG CCGAAGGGGT GGACTTGCCC
GGTGCATATT GCGAGCACGT GGTAATCGCC AAAATTCCAT TCGCGGTGCC GGACGACCCG
GTCGAGGCGG CGCTGGCCGA GTGGATCGAG GCGCGTGGCG GCAACCCGTT TATGGAAATC
GCCGTGCCTG ATGCGTCGTT GCGTCTGGTG CAGGCCTGTG GCCGGTTGCT GCGCACCGAA
GAAGACCGCG GCACCATCAC GCTGCTGGAC CGTCGCGTCG TCACCCAGCG CTACGGCAAG
GCGATTCTCA ATGCGTTGCC GCCGTTCCGC CGCGAGATTT CCTGA
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| Protein sequence | MISTELKTQI QGAYSRFLEA KSLKPRYGQR LMIAEVAKVL GDIDTDEEGR RSGDPAVVAV
EAGTGTGKTV AYAIAAIPTA KAAGKRLVIA TATVALQEQI VYKDLPDLMR NSGLNFTFSL
AKGRGRYMCL SKLDALLQES DATNATAQLF EEEGFKIEVD EASQKLFTSM LQKLAGNKWD
GDRDSWPQEL ADQDWARLTT DHSQCTNRHC PNFQQCAFYK AREGMGKVDV IVTNHDMVLA
DLALGGGAVL PDPRDTLYVF DEGHHLPDKA IGHFAHYTRL KSTADWLEQT AKNLAKLLAQ
HPLPGDLGKL IEQVPELARE IKGHQQFMFG ACEQLADFRA GEDMQGRERP RHRFIGGVIP
EHIREMGIEL KKGFARLDDL FTRLTELLKE GMDGEVNIGI ASHQAEEWYP LFGSLLARAH
GNWELWTAFT AEDPEDSPPM ARWLTLADSG ALFDIEVNAS PILAAEMLRR NLWNIAYGAL
VTSATLTALG KFDRYRMRAG LPKGAVTAVV PSPFHHADAG VLRVPDLKAD PRDSVAHTAA
IIRDLPGLVE GSRGTLVLYS SRKQMQDVFD GLDRDWRKQV FIQGNLSKQE TLNKHKARVD
SGESSVLFGL ASFAEGVDLP GAYCEHVVIA KIPFAVPDDP VEAALAEWIE ARGGNPFMEI
AVPDASLRLV QACGRLLRTE EDRGTITLLD RRVVTQRYGK AILNALPPFR REIS
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