| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4108 |
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| Symbol | |
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| ID | 1185788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4631636 |
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| End bp | 4632760 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395454 |
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| Product | high-affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_793869 |
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| Protein GI | 28871250 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0910585 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGG GTACCAATAA GCTTTCAAGG CTGTTTGCCG CACTGGTTAT GGCGGGGGTT
GCCAGCCATT CGTTCGCAGC TGACACCATC AAGATCGGCA TCGCCGGCCC GAAAACCGGT
CCTGTTGCCG AGTACGGCAC CATGCAGTTC AACGGTGCCA AAATGGCCAT CGAGCAGATC
AACGCCAAAG GCGGCGTCGA TGGCAAAAAG CTTGAAGCCG TCGAGTACGA CGATGCTTGC
GACCCGAAAC AGGCCGTTGC AGTCGCCAAC AAAGTGGTCA ACGACGGCGT GAAATACGTG
GTCGGTCACC TGTGCTCCAG CTCCGCTCAG CCAGCGTCCG ATGTTTACGA AGACGAAGGC
ATCATCATGG TCACCCCGGC TGCCACCAGC CCGGAAATCA CCGCGCGCGG CTACAAGATG
GTGTTCCGCA CCATCGGTCT GGACAGCGCT CAGGGCCCGG CAGCAGGCAA CTACATTGCC
GATGTCGCCA AACCGAAAAT CGTCGCTGTC ATTCACGACA AGCAGCAGTA CGGCGAAGGT
ATCGCGACAG CCGTGAAGCA GACGCTGGAA GCCAAAGGCT TCAAGGTTGC GCTGTTTGAA
GGCATCAACG CTGGCGACAA GGACTTCTCC TCGCTGATCG CCAAACTCAA GCAAGCCAAT
GTCGATTTCG TCTACTACGG CGGCTACCAC CCTGAGCTGG GGCAGATCCT GCGCCAGTCC
AAGGAAAAGG GCCTGAACGC CAAGTTCATG GGTCCTGAAG GCGTCGGCAA CGAGTCCATC
TCGCAAATTG CTGGTGATGC CTCCGAAGGC ATGCTCGTCA CCCTGCCGAA ATCCTTCGAT
CAGGACCCGG CCAACCAGGC ACTGACCAAA GCGTTCCAGG ACAAGAAGCA GGACCCGAGC
GGCCCGTTCG TGTACCCGTC GTACTCCGCC GTTCAGGTCA TTGCTGACGG CATCGCTGCC
GCCAAGTCCG AAGACACCGC CAAGGTGGCA GCTGCCATCC ATGCCGGCAC CTTCAAGACC
CCAATGGGCG AGCTGAGCTA CGACGCCAAG GGCGACCTGA AGAACTTCCA GTTCGTGGTC
TACGAGTGGC ACTTCGGCAA ACCGAAGACC GAAGCCGCCA AATAA
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| Protein sequence | MTKGTNKLSR LFAALVMAGV ASHSFAADTI KIGIAGPKTG PVAEYGTMQF NGAKMAIEQI
NAKGGVDGKK LEAVEYDDAC DPKQAVAVAN KVVNDGVKYV VGHLCSSSAQ PASDVYEDEG
IIMVTPAATS PEITARGYKM VFRTIGLDSA QGPAAGNYIA DVAKPKIVAV IHDKQQYGEG
IATAVKQTLE AKGFKVALFE GINAGDKDFS SLIAKLKQAN VDFVYYGGYH PELGQILRQS
KEKGLNAKFM GPEGVGNESI SQIAGDASEG MLVTLPKSFD QDPANQALTK AFQDKKQDPS
GPFVYPSYSA VQVIADGIAA AKSEDTAKVA AAIHAGTFKT PMGELSYDAK GDLKNFQFVV
YEWHFGKPKT EAAK
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