Gene PSPTO_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4100 
Symbol 
ID1185780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4620529 
End bp4621050 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content58% 
IMG OID637395446 
ProductMaoC-like domain protein 
Protein accessionNP_793861 
Protein GI28871242 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGGC CCGCTTCAAT TCATTTTGAT TTTCATTGTC AGGACAGCCA CATGACTCAA 
GTCACCAACA CGCCTTACGA AGCCCTTGAA GTCGGTCAGA CCGCCAGCTA CAGCAAGACC 
GTCGAAGAAC GGGACATTCA ACTGTTCGCG GCGATGTCCG GCGACCACAA CCCGGTTCAC 
CTGGACGCAG AATACGCCGC CAAGACCATG TTCAAGGAGC GCATTGCCCA CGGCATGTTC 
AGTGGCGCGC TGATCAGTGC TGCCGTTGCC TGCGAGCTGC CTGGGCCGGG CACCATTTAT 
ATCGGTCAAC AGATGACGTT CCAAAAGCCT GTGAAGCTGG GTGACACGCT GACGGTGCGC 
CTGGAAATTC TGGAAAAGCT GCCGAAATTC CGCGTCCGCA TCGCCACCCG CGTGTTCAAC 
CAGAACGACG AACTGGTGGT AGACGGCGAA GCCGAGATCC TGGCCCCGCG TAAAAAGCAG 
ACTGTCGACC TGACCGTGCT CCCGGAGATC ACCTTCGGCT GA
 
Protein sequence
MNRPASIHFD FHCQDSHMTQ VTNTPYEALE VGQTASYSKT VEERDIQLFA AMSGDHNPVH 
LDAEYAAKTM FKERIAHGMF SGALISAAVA CELPGPGTIY IGQQMTFQKP VKLGDTLTVR 
LEILEKLPKF RVRIATRVFN QNDELVVDGE AEILAPRKKQ TVDLTVLPEI TFG