Gene PSPTO_4094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4094 
Symbol 
ID1185774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4610578 
End bp4611699 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content59% 
IMG OID637395440 
Product3-oxoacyl-(acyl-carrier-protein) synthase III, putative 
Protein accessionNP_793855 
Protein GI28871236 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACAACG TCGTCATCAG CGGCACAGGC CTGTACACCC CGGCCGACAG CATTTCCAAT 
GAAGAGCTGG TGCAGTCCTT CAATGCCTAC GTTGCACAGT TCAACGCTGA CAACGCAGCC 
GCCATCGAGC GCGGAGAAGT GCAAGCGCTC AGCGAGTCCA GCGCCGCGTT CATCGAGAAG 
GCATCGGGCA TCAAAAGCCG CTTTGTGATG GACAAACAGG GCATTCTCGA CCCGCAACGC 
ATGAAGCCCA ACCTGCCTGA ACGCGGCAAT GACCAATGGT CGATCCTGTG CCAGATGGGT 
GTTGCGGCAG CCAATCAGGC GCTACAGCGC GCAGGCAAGA CGGCTGCTGA TATCGACGGC 
GTTATCGTCG CCTGCTCCAA TCTGCAACGA GCGTACCCGG CGATCTCCAT CGAGATTCAG 
GAAGCGCTGG GCGTTGCGGG CTACGGTTTT GACATGAACG TCGCCTGTTC TTCGGCCACC 
TTCGGTATTC AGGCCGCCTG CAACAGCGTG CAGCTCGGCC AGGCCCGCGC CTTGCTGGTG 
ATCAGCCCGG AAATCTGCAC CGCGCACCTG AATTTTCGCG ACCGCGACAG CCATTTCATC 
TTCGGTGACG GCGCCACGGC GGTGGTGGTC GAGCGTGCAG ACCTCGCCAC GTCGGCTTTT 
CAGTTCGATA TCGTCAGCAC CCGTTTGTTG ACCAAATTCT CCAACAACAT CCGCAACAAC 
TTCGGTTTCC TCAACCGCAC GTCAGATGAA GGCCAGAACG CACCGGACAA ACTGTTCGTG 
CAGGAAGGCC GCAAGGTGTT CCGTGAGGTG TGCCCGATGG TCGCCGAGCT GGTCAGCGCG 
CATTTGCAGG ACAACGGCAT CAACATCAGT GACGTGAAGC GCTTCTGGCT GCATCAGGCC 
AACCTGAGCA TGAACCACCT GATCACCAGG AAGCTGCTGG GCCGCGATGC CACGGTCGAA 
GAAGCACCGG TGATTCTCGA CACCTACGGC AACACCAGCT CGGCCGGATC GGTCATTGCG 
TTTCATACCT ATCAGGATGG TTTGCCGAAA GGCGCGCTGG CGGTACTGAG TTCGTTTGGT 
GCCGGTTACT CGATTGGCAG CGTGATTCTG CGCAAACGCT GA
 
Protein sequence
MHNVVISGTG LYTPADSISN EELVQSFNAY VAQFNADNAA AIERGEVQAL SESSAAFIEK 
ASGIKSRFVM DKQGILDPQR MKPNLPERGN DQWSILCQMG VAAANQALQR AGKTAADIDG 
VIVACSNLQR AYPAISIEIQ EALGVAGYGF DMNVACSSAT FGIQAACNSV QLGQARALLV 
ISPEICTAHL NFRDRDSHFI FGDGATAVVV ERADLATSAF QFDIVSTRLL TKFSNNIRNN 
FGFLNRTSDE GQNAPDKLFV QEGRKVFREV CPMVAELVSA HLQDNGINIS DVKRFWLHQA 
NLSMNHLITR KLLGRDATVE EAPVILDTYG NTSSAGSVIA FHTYQDGLPK GALAVLSSFG 
AGYSIGSVIL RKR