Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4092 |
Symbol | |
ID | 1185772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4604386 |
End bp | 4605513 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395438 |
Product | hypothetical protein |
Protein accession | NP_793853 |
Protein GI | 28871234 |
COG category | [S] Function unknown |
COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTTC ACGTCATCGA CAGCCTCGGC ACCGTTGCGC CTGCCCAATG GGACGCACTG GTGCCGGGCA ATCAGCCGTT CCTGCGCCAT GCCTTTCTCA GCTCGCTGGA AGACAGCGGC AGCCTCGGGC CGCGCTCCGG TTGGCGTGCC GAGCATGTGC TGCACTACGA AAACGATCAG TTGGTGGCGG CGTTACCGGC TTATCGAAAG TGGCATTCGT ACGGCGAATA TGTGTTCGAC CACGGCTGGG CAGACGCCTG TCGCCGTGCT GGCATTGCTT ATTACCCCAA GCTGTTGGTG GCGGTGCCGT TCAGCCCGGT TAGTGGTTCG CGGATTCTGT CTGCAACGCC ACAGGGCGGT AGGGAGTTGC TCAGCGAGCT GCCGGCCTAT CTGCAGAGCG AGGGCCTGTC GAGCGCGCAT GTGAACTTCA CCGACCCTGC CGCAGATGCC TTGCTTGAGT CGCAACCGGG CTGGCTGCAG CGCATTGGCT GTCAGTTCCA TTGGCATAAC CGTGGCTACC GGGACTTTCA GGACTTTCTT GATGCATTGA GTTCGCGCAA GCGTAAACAG ATGCGCAAGG AGCGTGAGCA AGTGGCGGGG CAGGGCATCG AGTTTGAATG GCTCGAAGGT GGGCAAATGA GCGAAGTGCT GTGGGACTTT GTTTATGCCT GCTATTCCAA TACCTACGAA ATTCGTGGGC AGGCGCCTTA CCTGACCCGC GAATTCTTCA GCCTGCTGGC CGAGCGCATG CCTGAATCGA TTCGTGTGGT CATCGCCTTG CAGGGCTCAC GGCCTGTGGC GATGGCCTTT AGCCTGATCG GTGGCGACAG CTTTTACGGG CGTTACTGGG GCTGTCTGGC CGAGTTCGAC CGTCTGCATT TCGAGACCTG TTTCTACCAG GGCATGGACT ACGCCATCGC CCACGGCCTG CAACGGTTCG ACGCGGGTGC CCAGGGCGAA CACAAGCTGA TCCGCGGCTT TGAACCGCAG ATCACCCGTT CATGGCATTA CCTGATGCAC CCAGGGTTGA AAGACGCTGT GAGCGAGTTT CTGGAGCAGG AGCGAGCGGG CATAATGGCG TATGCCGAGC AAGCACGGAG CGCGTTGCCG TATCGGCACG TAGACTGA
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Protein sequence | MPVHVIDSLG TVAPAQWDAL VPGNQPFLRH AFLSSLEDSG SLGPRSGWRA EHVLHYENDQ LVAALPAYRK WHSYGEYVFD HGWADACRRA GIAYYPKLLV AVPFSPVSGS RILSATPQGG RELLSELPAY LQSEGLSSAH VNFTDPAADA LLESQPGWLQ RIGCQFHWHN RGYRDFQDFL DALSSRKRKQ MRKEREQVAG QGIEFEWLEG GQMSEVLWDF VYACYSNTYE IRGQAPYLTR EFFSLLAERM PESIRVVIAL QGSRPVAMAF SLIGGDSFYG RYWGCLAEFD RLHFETCFYQ GMDYAIAHGL QRFDAGAQGE HKLIRGFEPQ ITRSWHYLMH PGLKDAVSEF LEQERAGIMA YAEQARSALP YRHVD
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