Gene PSPTO_4092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4092 
Symbol 
ID1185772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4604386 
End bp4605513 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content60% 
IMG OID637395438 
Producthypothetical protein 
Protein accessionNP_793853 
Protein GI28871234 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTTC ACGTCATCGA CAGCCTCGGC ACCGTTGCGC CTGCCCAATG GGACGCACTG 
GTGCCGGGCA ATCAGCCGTT CCTGCGCCAT GCCTTTCTCA GCTCGCTGGA AGACAGCGGC
AGCCTCGGGC CGCGCTCCGG TTGGCGTGCC GAGCATGTGC TGCACTACGA AAACGATCAG
TTGGTGGCGG CGTTACCGGC TTATCGAAAG TGGCATTCGT ACGGCGAATA TGTGTTCGAC
CACGGCTGGG CAGACGCCTG TCGCCGTGCT GGCATTGCTT ATTACCCCAA GCTGTTGGTG
GCGGTGCCGT TCAGCCCGGT TAGTGGTTCG CGGATTCTGT CTGCAACGCC ACAGGGCGGT
AGGGAGTTGC TCAGCGAGCT GCCGGCCTAT CTGCAGAGCG AGGGCCTGTC GAGCGCGCAT
GTGAACTTCA CCGACCCTGC CGCAGATGCC TTGCTTGAGT CGCAACCGGG CTGGCTGCAG
CGCATTGGCT GTCAGTTCCA TTGGCATAAC CGTGGCTACC GGGACTTTCA GGACTTTCTT
GATGCATTGA GTTCGCGCAA GCGTAAACAG ATGCGCAAGG AGCGTGAGCA AGTGGCGGGG
CAGGGCATCG AGTTTGAATG GCTCGAAGGT GGGCAAATGA GCGAAGTGCT GTGGGACTTT
GTTTATGCCT GCTATTCCAA TACCTACGAA ATTCGTGGGC AGGCGCCTTA CCTGACCCGC
GAATTCTTCA GCCTGCTGGC CGAGCGCATG CCTGAATCGA TTCGTGTGGT CATCGCCTTG
CAGGGCTCAC GGCCTGTGGC GATGGCCTTT AGCCTGATCG GTGGCGACAG CTTTTACGGG
CGTTACTGGG GCTGTCTGGC CGAGTTCGAC CGTCTGCATT TCGAGACCTG TTTCTACCAG
GGCATGGACT ACGCCATCGC CCACGGCCTG CAACGGTTCG ACGCGGGTGC CCAGGGCGAA
CACAAGCTGA TCCGCGGCTT TGAACCGCAG ATCACCCGTT CATGGCATTA CCTGATGCAC
CCAGGGTTGA AAGACGCTGT GAGCGAGTTT CTGGAGCAGG AGCGAGCGGG CATAATGGCG
TATGCCGAGC AAGCACGGAG CGCGTTGCCG TATCGGCACG TAGACTGA
 
Protein sequence
MPVHVIDSLG TVAPAQWDAL VPGNQPFLRH AFLSSLEDSG SLGPRSGWRA EHVLHYENDQ 
LVAALPAYRK WHSYGEYVFD HGWADACRRA GIAYYPKLLV AVPFSPVSGS RILSATPQGG
RELLSELPAY LQSEGLSSAH VNFTDPAADA LLESQPGWLQ RIGCQFHWHN RGYRDFQDFL
DALSSRKRKQ MRKEREQVAG QGIEFEWLEG GQMSEVLWDF VYACYSNTYE IRGQAPYLTR
EFFSLLAERM PESIRVVIAL QGSRPVAMAF SLIGGDSFYG RYWGCLAEFD RLHFETCFYQ
GMDYAIAHGL QRFDAGAQGE HKLIRGFEPQ ITRSWHYLMH PGLKDAVSEF LEQERAGIMA
YAEQARSALP YRHVD