| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4091 |
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| Symbol | |
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| ID | 1185771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4602462 |
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| End bp | 4604294 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395437 |
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| Product | ABC transporter, ATP-binding/permease protein |
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| Protein accession | NP_793852 |
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| Protein GI | 28871233 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0803284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTATC GTCGTTTTGA ACAACTGATC GATATCTTCA AAGACGCCCC TACCGCTTCC
CCGCCCAACA CCGTTTTTGC GTTCTACCTG TACTACCTGC GTCAGGTATG GCCGACGTTT
CTCGCGCTGT TGGTCGTGGG CCTGATCGGT GCGCTGATCG AGGTGTCGCT GTTCAACTAC
CTGAGCCGCA TCATTGACCT GGCGCAAACC ACGCCGCCGA AGGATTTTTT CAGCCTTCAC
GGCCCGGAAC TGATCTGGAT GGTAGTGGTG GCCCTGCTGC TGCGTCCGAT CTTCGTCGGT
CTGCACGACC TGCTGGTGCA CCAGACCATC AGCCCCGGCA TGACTAACCT GATCCGCTGG
CAAAACCACA GCTACGTGCT CAAACAGAGC GTCAACTTTT TCCAGAACGA TTTTGCCGGG
CGCATTGCCC AGCGCATCAT GCAGACCGGC AACTCGCTGC GCGACTCGGC CGTGCAGTCG
GTGGACGCGC TGTGGCATGT GTTGATCTAC GCGATCAGCG CCATGGTGCT GTTCGCCGAG
GCTGACTGGC GACTGATGAT CCCGCTGGGT ACCTGGATCC TGGCGTTCAT CCTCTCGCTG
ATGTATTTCG TCCCCAGGGT CAAACAGCGC TCGGTGGATT CGTCCGACGC GCGCTCAAAG
CTCATGGGCC GGATAGTTGA TGGCTACACC AACATCACCA CCCTGAAACT GTTCGCCCAC
ACCAATCACG AACAGCAATA CGCGCGTGAA GCGATGCGTG ACCAGACCGA AAAAAGCCAG
CTGGCCGGCC GGGTCGTGAC GTCGATGGAC ACCACCATCA CCACCATGAA CGGCGTGCTG
ATTGTTACCA CGACCGGGCT GGCGCTCTGG CTGTGGACCC AGTCAATGAT CTCGGTGGGC
GCCATTGCGC TGGCCACAGG CCTGGTGATT CGTATCGTCA ACATGTCCGG CTGGATCATG
TGGGTGGTCA ACGGTATTTT CGAGAACATC GGCACCGTGC AGGACGGCCT GGAAAGTATT
TCGCAGCCTG TCACGGTCAA TGACCAGCCC GGCGCTAAAC CGTTGAAGAT CGAGAACGGT
GGCGTCAGGT TCGACGGGGT TGATTTCCAT TATGGCAATG GCAACGGGAT CATTCACAAC
CTCAACCTGG ACATAAAACC CGGCGAGAAG ATCGGTTTGA TCGGGCCATC CGGCGCTGGT
AAATCGACGT TGGTGAATCT GTTGCTGCGC ATGTATGACG TGCAGGGCGG CAGGATTCTG
ATCGACGGCC AGGATATTTC CCGGATAACC CAGGAAAGCC TGCGTGCGCA GATCGGCATG
ATCACTCAGG ATACTTCGCT GTTGCACCGC TCGATTCGCG AAAACCTGCT GTATGGCAAT
CCTGACGCGA CCGATGAACA GCTCTGGGAG TCGATCCACA AGGCCCGCGC CGATGAGTTT
ATTCCGCTGT TATCGGACTC CGAAGGCCGT ACCGGTTTCG ATGCGCATGT CGGTGAGCGC
GGCGTCAAGC TGTCCGGTGG TCAGCGCCAG CGTATCGCGA TCACCCGCGT GCTGCTCAAG
GACGCGCCGA TTCTGATCAT GGACGAAGCC ACCTCGGCAC TCGACTCGGA AGTCGAAGCG
GCGATTCAGG AGAGCCTGGA AACGTTGATG CAAGGCAAAA CCGTGATCGC CATCGCTCAC
CGCCTGTCGA CCATCGCCCG CATGGATCGC CTGGTCGTCC TGGAAAAAGG CCAGATCGCC
GAAACCGGCA CCCATGCCGA ACTGCTGGCC CGCGGCGGGT TATATGCGCG ATTGTGGCAA
CATCAGACCG GCGGGTTTGT GGGGGTGGAT TGA
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| Protein sequence | MLYRRFEQLI DIFKDAPTAS PPNTVFAFYL YYLRQVWPTF LALLVVGLIG ALIEVSLFNY
LSRIIDLAQT TPPKDFFSLH GPELIWMVVV ALLLRPIFVG LHDLLVHQTI SPGMTNLIRW
QNHSYVLKQS VNFFQNDFAG RIAQRIMQTG NSLRDSAVQS VDALWHVLIY AISAMVLFAE
ADWRLMIPLG TWILAFILSL MYFVPRVKQR SVDSSDARSK LMGRIVDGYT NITTLKLFAH
TNHEQQYARE AMRDQTEKSQ LAGRVVTSMD TTITTMNGVL IVTTTGLALW LWTQSMISVG
AIALATGLVI RIVNMSGWIM WVVNGIFENI GTVQDGLESI SQPVTVNDQP GAKPLKIENG
GVRFDGVDFH YGNGNGIIHN LNLDIKPGEK IGLIGPSGAG KSTLVNLLLR MYDVQGGRIL
IDGQDISRIT QESLRAQIGM ITQDTSLLHR SIRENLLYGN PDATDEQLWE SIHKARADEF
IPLLSDSEGR TGFDAHVGER GVKLSGGQRQ RIAITRVLLK DAPILIMDEA TSALDSEVEA
AIQESLETLM QGKTVIAIAH RLSTIARMDR LVVLEKGQIA ETGTHAELLA RGGLYARLWQ
HQTGGFVGVD
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