| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4089 |
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| Symbol | |
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| ID | 1185769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4600859 |
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| End bp | 4601647 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395435 |
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| Product | hydrolase, alpha/beta fold family |
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| Protein accession | NP_793850 |
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| Protein GI | 28871231 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.05653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTT TCGAGCACGA TGACTGTTCA CTGCACTACG AAGAGTACGG CCAGGGCGAG
CCTGTTCTGC TGCTGCACGG CCTGGGTTCC AGCTGCCAGG ACTGGGAGTA CCAGATTCCG
GTGCTGGCCA GCCACTACCG CGTCATTGTC ATGGACATGC GCGGTCATGG CCGCTCCGAC
AAGCCACACG AGCGCTACAG CATTAAAGCC ATGAGCAATG ACGTCGAAGC GCTGATCGAG
CACCTTCGGT TGGGGCCGGT GCACTTGGTG GGCCTGTCGA TGGGCGGGAT GATCGGCTTC
CAGCTGGCGG TCGATCAGCC GCACCTGCTC AAAAGCCTGT GCATCGTCAA CAGCGCGCCG
CAGGTCAAGG TCAAAAGTCC AGGCGATCTG TGGCAGTGGA TCAGGCGCTG GACCCTGTCA
CGCCTCGTCA GCATGGAAAC CCTCGGCAAG GCGCTGGGCA AGCTGCTGTT CCCCAAACCG
GAGCAGGCCG AGCTGCGGCG CAAGATGGCC GAACGCTGGG GCAGGAACGA CAAACGCGCC
TATCTGGCCA GCTTCGACGC CATCGTAGGC TGGGGTGTGG AGAACAGGCT GGGGCGTATC
ACCTGCCCGA CCTTGATTGT TGCGGCTGAA CACGACTACA CCCCGGTGTC GCTCAAGGAG
GCCTACGTCA AAAGCCTGCC CAACGCGCGA CTGGTGATCA TCAATGACTC CCGGCACGCG
ACGCCGCTGG ACCAGCCTGA GCAATTCAAT CGCACGCTGC TGGAATTCAT CGCGGGCACT
GGAGTCTGA
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| Protein sequence | MAFFEHDDCS LHYEEYGQGE PVLLLHGLGS SCQDWEYQIP VLASHYRVIV MDMRGHGRSD
KPHERYSIKA MSNDVEALIE HLRLGPVHLV GLSMGGMIGF QLAVDQPHLL KSLCIVNSAP
QVKVKSPGDL WQWIRRWTLS RLVSMETLGK ALGKLLFPKP EQAELRRKMA ERWGRNDKRA
YLASFDAIVG WGVENRLGRI TCPTLIVAAE HDYTPVSLKE AYVKSLPNAR LVIINDSRHA
TPLDQPEQFN RTLLEFIAGT GV
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