| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4079 |
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| Symbol | |
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| ID | 1185759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4584274 |
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| End bp | 4587759 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395426 |
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| Product | sensor histidine kinase/response regulator |
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| Protein accession | NP_793841 |
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| Protein GI | 28871222 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCGC ACCTGCGCAA GCCGCGGGCA TGGATATTGC TGGCTTTTGT TGTACAGCGT
TTGTTTTATC AGGGAGCTTC GAACGACCTA TTACCCCTCC TCTGGAGACG TACCGTGCGA
CCTTCAGGCT CTCAGCGCAT CATAAAAATT CGACGCGACT ACAACCGCCT GGTCGCCGAC
GAAACAATGG AAGACTACGC GCTCAGGTTC ACGCCCAAAT CGTTTCGCAA ATGGTCGGAA
TGGCGCATTT CGAACACGGC CGTTGGTGCC GTGTCCTTTT TGGCACTCGA GGCCATCGGC
GGCGCGCTGG TGATCAGCTA CGGGTTCACC AATACCCTCT GGGCAATCCT CGCCACTGCA
CTGGTGATCT TCCTGACCGG CCTGCCAATC AGCTACTACG CGGCGCGCTA TGGCGTCGAC
ATGGACCTGC TGACCCGTGG CGCAGGGTTC GGCTACATCG GCTCGACCAT CACGTCGCTG
ATCTACGCCA GCTTCACCTT TCTGTTCTTC GCCCTTGAAG CGGCAATCAT GGCCCTGGCG
CTGGAGCTTT ACTTCCACAT TCCGATTGCG CTGGCCTACA TCATTTGCTC AATCATCGTC
ATCCCGCTGG CGGTTTACGG CGTCACCCTG ATCAGCCGCT TGCAGATGTG GTCGCAACCG
TTGTGGCTGA CGCTGCTGCT GGTGCCCTAT GTGTTCGTGA TCTGGAAAAA CCCCGATGCC
CTCGGCGACT GGCTGAGTTT CTCCGGGCGC GAAGGTGAAG GCGGCACCTT TGACCTGTTG
TTTTTCGGTG CGGCGTTCAG CGTCGCGCTG TCGTTGGTGA CGCAGATCGG CGAGCAGGTC
GACTACCTGC GCTTTCTCCC GGAAAAGACC CGGCACAACC GCAAACGCTG GTGGGCCGCA
TTGCTCATGG CAGGGCCTGG CTGGATCATC CCCGGCGCGC TGAAAATCAT GGCCGGGGCC
TTCCTGGCTT TTCTCGCCCT GCAACATGAA GTGCCCGTTG AGCGCGCCGC CGAGCCGACG
CAGATGTACC TGGTCGCCTT CCGGTACGTG TTCAGTTCCC CCGAGTGGGC GCTGGCGGCC
ATGACCCTGT TCGTAATCAT TTCCCAGATC AAGATCAACA TGACCAATGC CTACGCAGGC
TCGCTGGCCT GGTCGAACTT TTTTGTCCGC GTCACCCACA GCCACCCGGG GCGTGTGGTC
TGGCTGGTCT TCAACGTGGC CATCGCGCTG GTGCTGATGG AGCTCGGCGT GTTCGATGCC
ATCGAGCAGG TGCTGGGGCT GTATGCCAAC GTCGCCATTG CCTGGATTGG TGCGCTGGTC
GCTGATCTGG TCATCAACAA GCCTATGGGC TGGTCGCCGA AACACATCGA GTTCAAGCGC
GCGCACCTTT ACGACATCAA CCCCGTGGGC GTCGGTGCCA TGTCGATTGC CTCACTGGTG
TCGTTCTGCG CCCACTTCGG GCTGTTCGGT GCCATTGCTC AAGCCGCACC GCCCTTGATT
TCGCTGGCCA TCGCGCTGGT CACCGCCCCG CTGCTCGCCT GGCTGACCGA CGGCAAGTAC
TACATCGCCC GCACCAGCTC CGACACCCTG CTCTACCCGC AAGGACGGCA GGAATCATTG
CTGTGCGGCC TGTGCAACAA CGCCTTTGAA ACGCCCGACA TGGCCTACTG CCCGGCCTAT
CGAACGCCCA TCTGTTCGCT GTGTTGCTCA CTGGATGCGC GTTGCGGGGA CCAGTGCAAA
CCACGGGCGC GGCTGTCCAT GCAGTTCGAG GACCTGATCG GCAAGGTACT GCCACGCTTT
CCGCGCCACT ACCTGCACAC CCGGCTGGCG CAATACCTGG GCCTGTTGAC CATCCTGGTG
GCGGGCTCGT CGGGAGCACT TGCGTTGATC TACAACCAGG TCGCCCATGG CCTGATCGAC
CAATCGCCAG AGGCCCATCA CCTGTTGATG CTGGCCTTCC TGAAAGCGTT TTTGACCGTC
TGCGTGTTCG CCGGGGTCCT CGCCTGGTGG GTGGTGCTGA CCCGAGAAAG CCGCCGGGTG
GCGCAGGAAG AGTCCGAGCG CCAAACCTCC CTGCTCATAC AGGAAATCGA CGCCCACGAA
AAAACCGACC AGGCGCTGCA AAAAGCCAAG GAAGCTTCGG AGGCCGCCAA CGCAGCGAAA
AGTCGCTACA TCACCGGGCT GTCCCATGAA CTTCGCACGC CCCTGAACAG CATTCTGGGC
TTCACGCAGA TTCTGCAACG CGACACAACG ACCCCGCCCC ATCATCAGGA CCCGCTGGCA
ACCATCATGC GCAGCAGTTC GCACTTGCTG TCGCTGATCA ACGGGTTACT GGACGTGGCC
AAGATCGAGG CCGGAAAACT GAAGCTTGAG CCCACCGAGA TTCTGTTTCA GGAATTCCTC
CACGACCTGG AAAAGATGTT CGCCGGCACC GCTCAGGAAA AAAACCTTGG TTTCCGCCTG
GAGCTGGAGG GCCGCATGCC TATGGTGGTG CGCGGTGACG AGAAACGGGT ACGGCAGATC
CTGATCAACC TGCTGGGCAA TGCCGTGAAT TTCACCGACA GCGGCGAAGT GGTGTTACGG
GTCAGTTATC GCCGCGAGAC CGCCATTTTC GACATCGTCG ACAGCGGCAT AGGCATTGCC
CCGGAGCAAA TTGAACGGAT CTTCCAGCCC TTCGAGCGTG GCGGTCAGAC GCGCCATGAC
AACGGCGTCG GCCTGGGCCT GACCATCACC CGCATGCTGA CCGCGTTGAT GGGCGGCGCG
CTGTCGGTTT CCAGCACGCC GGGCGAAGGC ACGCACTTCA AGGTGCGCCT GTTTCTGTCG
GAAGTGCGGG TGCCCAAGGC GGTGATCGAC GTCAATCATG ACGTGGTCGG CTATGACGGC
GAGCGGCGTC TGGTACTGGT GGTCGACGAC CACATCGAGC ACCGCAAGGT CATCAGCGGC
ATGCTCGAAC CGCTGGGCTT CACCGTCGCC CAGGCCGAAA ACGGTATGGA AGCAGTTCGC
CAGGTGTCCC TGCTGCACCC GGACCTGATC CTGATGGACC TGTCCATGCC GGACATGGAC
GGCTGGGCCA CCCTGCGCAT GATCCGTCGC AACGCACGCT CGAACGCGCC GGTCATCGTG
CTGTCGGCCA ACGCCAATGC AAGCACCGAC GACGACATCG GCCACGACTA CCTGTCCAAA
CCCGTGCACC TGCGCGACCT GCTGGATCGC CTCAAACATC ACCTTAACCT CAACTGGCAA
CATCGCTCCC GCACTGCCAG CGAAACAAAA ACCCCGTGGA TCCTGCCGCC GCGCGAAGAC
CTTGAAGACC TGTACACCCT GTGCGGTCTG GGGTACGTAC GCGGTATCCA GAACAAACTG
GACGCCATTG AAACCAGCAA CATCGCGAGC GGCAGTTTCG TCACCGACCT GCGCGCGCTG
GCCAAAGGTT TTCGTCTGGA TGAACTCAGC CTGCACCTCA AGGAGATGCT TGATGAACGC
CCTTAG
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| Protein sequence | MIAHLRKPRA WILLAFVVQR LFYQGASNDL LPLLWRRTVR PSGSQRIIKI RRDYNRLVAD
ETMEDYALRF TPKSFRKWSE WRISNTAVGA VSFLALEAIG GALVISYGFT NTLWAILATA
LVIFLTGLPI SYYAARYGVD MDLLTRGAGF GYIGSTITSL IYASFTFLFF ALEAAIMALA
LELYFHIPIA LAYIICSIIV IPLAVYGVTL ISRLQMWSQP LWLTLLLVPY VFVIWKNPDA
LGDWLSFSGR EGEGGTFDLL FFGAAFSVAL SLVTQIGEQV DYLRFLPEKT RHNRKRWWAA
LLMAGPGWII PGALKIMAGA FLAFLALQHE VPVERAAEPT QMYLVAFRYV FSSPEWALAA
MTLFVIISQI KINMTNAYAG SLAWSNFFVR VTHSHPGRVV WLVFNVAIAL VLMELGVFDA
IEQVLGLYAN VAIAWIGALV ADLVINKPMG WSPKHIEFKR AHLYDINPVG VGAMSIASLV
SFCAHFGLFG AIAQAAPPLI SLAIALVTAP LLAWLTDGKY YIARTSSDTL LYPQGRQESL
LCGLCNNAFE TPDMAYCPAY RTPICSLCCS LDARCGDQCK PRARLSMQFE DLIGKVLPRF
PRHYLHTRLA QYLGLLTILV AGSSGALALI YNQVAHGLID QSPEAHHLLM LAFLKAFLTV
CVFAGVLAWW VVLTRESRRV AQEESERQTS LLIQEIDAHE KTDQALQKAK EASEAANAAK
SRYITGLSHE LRTPLNSILG FTQILQRDTT TPPHHQDPLA TIMRSSSHLL SLINGLLDVA
KIEAGKLKLE PTEILFQEFL HDLEKMFAGT AQEKNLGFRL ELEGRMPMVV RGDEKRVRQI
LINLLGNAVN FTDSGEVVLR VSYRRETAIF DIVDSGIGIA PEQIERIFQP FERGGQTRHD
NGVGLGLTIT RMLTALMGGA LSVSSTPGEG THFKVRLFLS EVRVPKAVID VNHDVVGYDG
ERRLVLVVDD HIEHRKVISG MLEPLGFTVA QAENGMEAVR QVSLLHPDLI LMDLSMPDMD
GWATLRMIRR NARSNAPVIV LSANANASTD DDIGHDYLSK PVHLRDLLDR LKHHLNLNWQ
HRSRTASETK TPWILPPRED LEDLYTLCGL GYVRGIQNKL DAIETSNIAS GSFVTDLRAL
AKGFRLDELS LHLKEMLDER P
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