| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4078 |
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| Symbol | |
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| ID | 1185758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4582872 |
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| End bp | 4584116 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395425 |
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| Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_793840 |
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| Protein GI | 28871221 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.749846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACAT CCCTGACAAG CACCAAGCGC TCACTCCCCC GACGGCTGGC CTTGGGCACG
GCGGCGCTGT CGCTGATTGC CGCCAGTATT TTCGGTCAGG CAGCCATCGC CGCCGACGCC
AACACCACTG GCCTTGCGGT TACCGCGACC GAAGTCACTG TCGGTCAGTT GCACTCGGCC
ACCGGCACGA TGGCGATCTC TGAGACCGGT TCGATTCAAG CCGAGCGCCT GGCGATCGAG
CAGATCAACG CATCGGGCGG CATTCTCGGT CGGCAGATCA AAGTGGTGCA GGAGGATGGT
GCGTCCGATT GGCCGACCTT TGCCGAAAAA GCCAGAAAGC TGCTGGTCGG CGACAAGGTA
GCGGCGGTGT TTGGCTGCTG GACATCGGCC TCGCGCAAAG CCGTGCTGCC GGTGTTCGAG
AAGGAAAACG GGCTTTTGTA CTACCCGACG TTCTATGAAG GCCTGGAGCA ATCCAAAAAC
GTGATTTATA CCGGCCAGGA AGCGACCCAG CAGATTCTTG CGGGCCTGGA CTGGATTGCC
AAAGAGAAGG GCGCCAAGAC GTTTTACCTG ATCGGCTCGG ATTACATCTG GCCGCGTACC
TCGATGAAGA TCGCTCGCAA GCACATTGAA AACGTTCTGC ATGGCACCGT GGTCGGCGAG
GATTATTACC CGCTGGGCAA CACCCAGTTC GGCTCGCTGA TCAACAAGGT CAAGCTGAAG
AAACCGGATG TGGTGTTCGC CGCCGTGGTC GGTGGCTCCA ACGTAGCGTT CTACAAACAG
CTCAAGGCTG CAGGTGTGAC GTCCACCAAA CAGAACCTGC TGACCTTGTC GGTCACCGAA
GACGAACTGC TCGGCATCGG CGGCGAAAAC ATGGAAGGTT TCTACGCCTC CATGAAGTAC
TTCCAGAGCC TCGACAACCC CAACAACAAA GCCTTTGTTG ACGCGTTCAA GGCCAAATAC
GGCAAGGATT CGGTGATGGG CGACGTGACC CAGGCTGCCT ACCTCGGCCC ATGGTTGTGG
AAAGCCGCAG TCGAGAAAGC CGGCAGCTTT GATGTCGACA AGGTGGTCGC GGCATCCCCG
GGTATCGAGC TCAAGACGGC GCCTGAAGGC TACGTGAAAG TTCACGAAAA CCATCACCTG
TGGAGCAAGA CGCGCATCGG TGAGGTTCAA GCCAATGGCC AGTTCAAGGT GATCTACGAA
TCTGACCTGA TCGAGCCCAA CCCTTTCCCG AAAGGCTACC AGTAA
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| Protein sequence | MDTSLTSTKR SLPRRLALGT AALSLIAASI FGQAAIAADA NTTGLAVTAT EVTVGQLHSA
TGTMAISETG SIQAERLAIE QINASGGILG RQIKVVQEDG ASDWPTFAEK ARKLLVGDKV
AAVFGCWTSA SRKAVLPVFE KENGLLYYPT FYEGLEQSKN VIYTGQEATQ QILAGLDWIA
KEKGAKTFYL IGSDYIWPRT SMKIARKHIE NVLHGTVVGE DYYPLGNTQF GSLINKVKLK
KPDVVFAAVV GGSNVAFYKQ LKAAGVTSTK QNLLTLSVTE DELLGIGGEN MEGFYASMKY
FQSLDNPNNK AFVDAFKAKY GKDSVMGDVT QAAYLGPWLW KAAVEKAGSF DVDKVVAASP
GIELKTAPEG YVKVHENHHL WSKTRIGEVQ ANGQFKVIYE SDLIEPNPFP KGYQ
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