| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4076 |
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| Symbol | |
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| ID | 1185756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4580687 |
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| End bp | 4581862 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395423 |
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| Product | branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | NP_793838 |
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| Protein GI | 28871219 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.224441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAA TAGACAAACT CATGGGCGGA CGACAGGGTG TTATCGGCCT GCTGATCCTC
GCGGCCCTGA TTCTGCTGGT CTTTCCGCTT ACCCTGGACG CTTTTCGTCT GAACATGATC
GGCAAATACC TGACCTATGC CTTTGTCGCG GTGGGCCTGG TGTTGTGCTG GGGGTATGGC
GGAATTCTCA GCCTGGGCCA AGGCGTGTTT TTTGGTCTGG GCGGGTATTG CATGGCGATG
TTTCTCAAGC TGGAAGCCAG CGACCCCCAG AGCACGAAAA TCCAGTCAAC ACCGGGTATT
CCCGACTTCA TGGACTGGAA CCAGATCACC GAACTGCCAG CGTTGTGGGT GCCGTTTCAC
AGCTTCACGT TCAGCGTCTT CGCCGTGATT GCCGTGCCCG TGCTGCTCGC GTGGATCATC
GGCACTGCGC TGTTCAAGCG GCGTGTGGGC GATGTGTATT TCTCCATCGT CACCCAGGCA
ATTGCGCTGA TTCTCACGGT GCTGATCATC GGCCAGCAGG GCCTGACCGG AGGCATCAAC
GGTATTACCG ATCTCAAGAC GTTGCTGGGC TGGGACATCC GCAGCGATGG CGCCAAATTG
GCTCTGTATT TCGTCAATGC GGGCCTGCTG CTGGGCTGCA TCCTGATCGG CAAGTTCATT
CTGGCTTCCA AGCTCGGTCG CCTGCTGATG GCCATGCGCG ACAAGGAAGA GCGCGTACGG
TTTTCGGGCT ATGACGTGGC GGGTTTCAAG ATATTCGTTT ACTGCGTCGC GGCCGGTTTC
TCGGCCATCG GCGGGGCCAT GTTCGCTTTG CAGGTGGGTT TCATGTCGCC CTCGTTCGTG
GGCATCGTGC CGTCCATCGA GATGGTGATA TTTGCCGCAG TCGGCGGACG CATGTCGTTG
CTGGGGGCGG TGTATGGCTC GTTGCTGGTC AACTACGGGA AAACCTACTT CTCGGAGTCC
TTTCCAGAGC TCTGGCTGTA CTTGATGGGC GGGTTGTTTA TCGCTGTGGT CATGTACTTC
CCGGATGGCC TGGCGGGTCT GTGGGAAAGC CACGGGCGCA AGTGGCTGGG GCGCTTCAGA
CGCAGTGACA AGCCGGTCGC GCCTGCTATT CCCGGCGCTG GCCACGCACC CGTAAAAAGC
ACATCGGTGA AAAGCAGCGT GGAGACTCAG TCATGA
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| Protein sequence | MNAIDKLMGG RQGVIGLLIL AALILLVFPL TLDAFRLNMI GKYLTYAFVA VGLVLCWGYG
GILSLGQGVF FGLGGYCMAM FLKLEASDPQ STKIQSTPGI PDFMDWNQIT ELPALWVPFH
SFTFSVFAVI AVPVLLAWII GTALFKRRVG DVYFSIVTQA IALILTVLII GQQGLTGGIN
GITDLKTLLG WDIRSDGAKL ALYFVNAGLL LGCILIGKFI LASKLGRLLM AMRDKEERVR
FSGYDVAGFK IFVYCVAAGF SAIGGAMFAL QVGFMSPSFV GIVPSIEMVI FAAVGGRMSL
LGAVYGSLLV NYGKTYFSES FPELWLYLMG GLFIAVVMYF PDGLAGLWES HGRKWLGRFR
RSDKPVAPAI PGAGHAPVKS TSVKSSVETQ S
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