| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4075 |
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| Symbol | |
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| ID | 1185755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4579929 |
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| End bp | 4580690 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395422 |
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| Product | branched-chain amino acid ABC transporter, ATP-binding protein |
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| Protein accession | NP_793837 |
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| Protein GI | 28871218 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
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| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.416831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAGC CGACCGCGTT TCACATGCCC AAGCCGGTGC TTGCCATCGA AGGGCTGACC
GTGTCTTTCG ACGGTTTCAA GGCGGTGGAC GATCTCAATC TGTACATCGA CCGCAACGAA
GTCCGCGTAG TCATCGGGCC CAATGGTGCG GGCAAGACCA CCGTGCTCGA TTTGATCTGC
GGCAAGACCC GCGCCACCAG CGGCAGCATT GAGTTCAAGG GCCGTGAGCT CACCCGTATG
AAGGAGTACG ACATTGTGCG TGCCGGTGTG GGGCGCAAGT TCCAGACCCC GTCGATCTAC
GACAACCTGT CGGTGTTCGA GAACCTGGAA ATGTCTTTCC CCAAAGGCCG CACGGTATTC
GGCGCGCTGT TTTTTCAGCG TACCGATGAA GTGGTGGGCC GGGTGAATCA GGTGGCTGCA
GAAATTTTTC TCGGTGATCT GTTACGCCAG CAGGCAGGGC TGTTGTCCCA CGGCCAGAAG
CAGTGGCTGG AAATCGGCAT GTTGCTGATG CAGGACCCGG AGCTGTTGAT GCTCGACGAA
CCGGTCGCCG GGATGAGCGT CAGTGAGCGC GCGCAAACCG CCGAGCTGCT CAAGCGGATC
AGCCAGGGCC GCTCGGTGCT GGTGATCGAG CACGACATGG AGTTCGTCAA AAGCATCGCG
CACAAGGTCA CCGTGTTGCA TCAGGGCAAG GTGCTTGCCG AGGGCAGCAT GGAGTCGGTG
CAGAAGAACC CGAAAGTCAT TGAAGTCTAT CTGGGCCACT GA
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| Protein sequence | MSQPTAFHMP KPVLAIEGLT VSFDGFKAVD DLNLYIDRNE VRVVIGPNGA GKTTVLDLIC
GKTRATSGSI EFKGRELTRM KEYDIVRAGV GRKFQTPSIY DNLSVFENLE MSFPKGRTVF
GALFFQRTDE VVGRVNQVAA EIFLGDLLRQ QAGLLSHGQK QWLEIGMLLM QDPELLMLDE
PVAGMSVSER AQTAELLKRI SQGRSVLVIE HDMEFVKSIA HKVTVLHQGK VLAEGSMESV
QKNPKVIEVY LGH
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