Gene PSPTO_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4067 
Symbol 
ID1185747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4573831 
End bp4574727 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content49% 
IMG OID637395414 
Productoxidoreductase, short-chain dehydrogenase/reductase family 
Protein accessionNP_793829 
Protein GI28871210 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.122191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTGTC TGAGGTGCAG AGTTACCCAA GCACTTTCGA GAACAAGACA GGTTTGCGCC 
TTTCCTTCCA CTCATGGTAG TCGTATGAAA AAGACAGTTT TAATTACAGG TGCTTCATCG
GGCTTCGGGT TGCTGCTTGC TACTCATCTG CATCAACAAG GCTTCAACGT CGTGGGCACG
AGTCGTTATC CTGAAAAATA CGCGGGCAGC GTTCGGTTCA AACTACTGCG CCTGGACATC
GATGACGATA GCTCTGTCCA GGCGTTCACT GACGAGCTTT TTAAACATAT CACCCGATTG
GACGTATTGG TCAATAACGC GGGCTATATG GTCACCGGCC TTGCCGAAGA GACACCGATA
GAAACAGGTC GTCAGCAGTT CGAGACAAAT TTCTGGGGCA CGGTCAAAGT GACGAACGCC
CTCTTGCCTT ACATGCGTCG GCAGAAAAAT GGGCAAATTA TTACCGTCAG CTCGATGGTC
GGGTTGATAG GGCCACCTAA TCTGTCTTAC TACGCGGCCT CCAAACACGC TGTGGAAGGC
TACTTCAAGT CTTTGCGCTT TGAATTGAAT CAATTCAATA TCAATGTCAG CGTGATCGAA
CCCGGGTGGT TCAACACTAA TTTGGGGAGC AATGCCCACT CGGCGACGGG CGGCAAGATC
GCCGACTACG ATCTTTACCG TAAAAAAGTA GACCTGGTCA CCCAGAAGGG TATCGACGAG
GCAGAATCAC CAAAAGCCGT TGTGAACGCA ATCGTCAACG TGATCGCTAC AAAAAAACCA
CCGTTTAGCC ATCCTGTTGC AAAAATGGCC GGAATGATCT TGTTCCTTCA GCACTATCTG
CCGAGCGTTT TCGAGAACGC CATATTCAAA AGCATTGCCT CGGGCAAAAA GCTTTAA
 
Protein sequence
MHCLRCRVTQ ALSRTRQVCA FPSTHGSRMK KTVLITGASS GFGLLLATHL HQQGFNVVGT 
SRYPEKYAGS VRFKLLRLDI DDDSSVQAFT DELFKHITRL DVLVNNAGYM VTGLAEETPI
ETGRQQFETN FWGTVKVTNA LLPYMRRQKN GQIITVSSMV GLIGPPNLSY YAASKHAVEG
YFKSLRFELN QFNINVSVIE PGWFNTNLGS NAHSATGGKI ADYDLYRKKV DLVTQKGIDE
AESPKAVVNA IVNVIATKKP PFSHPVAKMA GMILFLQHYL PSVFENAIFK SIASGKKL