Gene PSPTO_4064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4064 
Symbol 
ID1185744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4571945 
End bp4572535 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content55% 
IMG OID637395411 
Producttranscriptional regulator, TetR family 
Protein accessionNP_793826 
Protein GI28871207 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.528803 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCTG ACGCCAGGAA AAACCGGGAA CGGATACTGG AAGTCGCGGT GGTGGAGTTG 
ACGGCTGATC CTGCGGTTGC GCTGAGCACA ATTGCGAAGA AGGCCGGGGT AGGGCAGGGC 
ACGTTTTATC GCCACTTCCC TACCCGAGAG AAACTGGTAT TCGAGGTTTA TCAGTTCGAA 
ATGCAGCAAG TGGCTTCATT GGCAGAACAG CTGCTCGCCA CCAAACCACC CAAAGACGCA 
CTACGGGAGT GGATGGACTG CCTTGTTGAA TATGCGATGA CCAAGGCGGG TCTCGCCATC 
GCGATACGAC AGGCTGCATC TGTGTATGAG TTTCCAGGGC AGACGGGATA CGTGCCGGTT 
CAGGCGGCTG CCGAGCTGCT TTTAAGGGCT AATGAAAGAG CCGGAACAAT CCGTAGCGGG 
ATTACTGCCG ACGACTTTTT TCTGGCCATC GCAGGTATAT GGCAAGTGGA TTCTCAAAGC 
CAATGGCGCT TGCGCATCGC CAGATTGATG AACCTGGTAA TGGACGGCCT GTGTGCTGGC 
AGCCCCGAAA GCCTGAACAA AACGATTGGC GTTAAAACCG CAGACCCATA A
 
Protein sequence
MRSDARKNRE RILEVAVVEL TADPAVALST IAKKAGVGQG TFYRHFPTRE KLVFEVYQFE 
MQQVASLAEQ LLATKPPKDA LREWMDCLVE YAMTKAGLAI AIRQAASVYE FPGQTGYVPV 
QAAAELLLRA NERAGTIRSG ITADDFFLAI AGIWQVDSQS QWRLRIARLM NLVMDGLCAG 
SPESLNKTIG VKTADP