| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4062 |
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| Symbol | |
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| ID | 1185742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4569320 |
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| End bp | 4570489 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395409 |
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| Product | mandelate racemase/muconate lactonizing enzyme family protein |
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| Protein accession | NP_793824 |
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| Protein GI | 28871205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCG TAGACATTCG TGAAAAAACG GTTTCTATCG CCTCCCCGAT TGCCAACGCC
TACATCGACT TTTCGAAAAT GACCTGCTCG GTCGTCGCGG TCATTACCGA TGTGATTCGC
GACGGCAAAC CTGTTATCGG CTACGGTTTC AACTCCAATG GTCGCTACGG TCAGGGCGCG
CTGATGCGTG ATCGTTTCCT GGCGCGTATT ACCGAAGCTG ACCCGGACAC GCTCATCGAC
CATGCAAACA ACAACCTGGA CCCATTCGCC ATCTGGAAAG CCCTGATGAC CAACGAGAAG
CCCGGCGGCC ACGGTGAGCG CTCGGTTGCA GTGGGCACCC TCGACATGGC GGTGTGGGAC
GCTGTCGCCA AGATTGAAGG TAAACCTTTG TACCGGCTGC TGGCTGACCG CTACCGCGAC
GGCGTGGCCG ACGACAAGGT CTGGGTCTAC GCAGCAGGTG GCTACTACTA CCCTGGCAAA
GACCAGACCA AGCTCAAGGC AGAAATGCAG AGCTATCTGG ACCGTGGCTA CGACGTCGTC
AAGATGAAGA TCGGTGCGGT GCCACTCGAC GAAGATATTC GTCGCATCGA AGCGGTGCTT
GAAGTGGTTG GGGACGGTCG TCGGCTGGCG GTCGATGCCA ATGGTCGTTT CGATCTTCAG
ACCGGTATTG CCTACGCCGA AGCCATCAAG AAGTACAACC TCTTCTGGTA CGAAGAGGTC
GGTGATCCAC TGGACTACGC GTTGCAGGCC GAGCTTGCCA ATCACTATGA ACTGCCGATG
GCGACCGGGG AAAATCTGTT CTCCCACCAG GATGCGCGCA ACCTCCTGCG CCACGGCGGC
ATGCGCCCTG ATCGCGATTA CCTGCAATTC GACTGTGCGC TGTCTTACGG GCTTGTGGAA
TACATGCGCA CCTTGAAGGT GATGGAAGAA ATGGGTTGGT CTTCCCGCCG CGTAGTGCCG
CATGGTGGCC ACCAGATGTC CCTGAACATC GCAGCCGGCT TGCACCTGGG CGGCAACGAA
TCTTACCCGG ATGTGTTTCA GCCTTTCGGC GGTTTTGCTG ACGGGATCAA GGTCGAGAAC
GGTTATGTCG GCCTGCCGGA TATTCCAGGT GTCGGCTTCG AAGCCAAGTC CGCGTTGTAC
GCCGTCATGC GCGAGTTGGG CGAAGGCTGA
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| Protein sequence | MRIVDIREKT VSIASPIANA YIDFSKMTCS VVAVITDVIR DGKPVIGYGF NSNGRYGQGA
LMRDRFLARI TEADPDTLID HANNNLDPFA IWKALMTNEK PGGHGERSVA VGTLDMAVWD
AVAKIEGKPL YRLLADRYRD GVADDKVWVY AAGGYYYPGK DQTKLKAEMQ SYLDRGYDVV
KMKIGAVPLD EDIRRIEAVL EVVGDGRRLA VDANGRFDLQ TGIAYAEAIK KYNLFWYEEV
GDPLDYALQA ELANHYELPM ATGENLFSHQ DARNLLRHGG MRPDRDYLQF DCALSYGLVE
YMRTLKVMEE MGWSSRRVVP HGGHQMSLNI AAGLHLGGNE SYPDVFQPFG GFADGIKVEN
GYVGLPDIPG VGFEAKSALY AVMRELGEG
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