Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4057 |
Symbol | |
ID | 1185737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4562518 |
End bp | 4563495 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637395404 |
Product | site-specific recombinase, phage integrase family |
Protein accession | NP_793819 |
Protein GI | 28871200 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.251442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCGA GAAAGAAGGA CAGGCACCTG CCGCCGTGCA TGTACCTCAA GCACGGCGCG TATTACCTGG TACGGAAGGG GAAGTGGGAA CGGCTCGGCA GCGACTTTCA GGAGGCGCTG CTGGCTTACG CGAAGATAGT TGGCGGGAAA AGCAACGGCG GGATGTCTTT GCTTATCGAT GAAGCGCTGG ACGCGATGCG TCGAAGGCTC TCAGAAAATA CAATCAAACA GTACGAAGCG GCTTCGGTGA GGCTCAAGAC GTATCTTGAA GAGTTCGAGC CCCGCCAGGT TCTGCCGCGC CATGTGGCAG CGCTTAAGCT ACACATGGCC GACACGCCGA ACATGGCCAA CCGCGTCATA TCGTTTCTGA GAATGGTCTT TGCCTATGCC CTCGAAAGGC AGATCGTCGA TTCCAATCCT TGCACCGGCA TACGCCGGCA CGCGGAAAAG AAGCGAGACC GATACATCAG CGATGCGGAG TTCGCCGCAA TCTGTGCGGC CTCATCGGAG TACATGAGCG TGATTTGGGA AATGTGCTTC CTGACAGGGC AGCGCATCAG TGACGTGCTC AACATCAAGC TGTCCGATAT TTCTGATGTT GGCATAGCCT TTGAACAACA GAAGACCGGA GCTAAGCTGA TAGTCGCCAT GAGCCCAGAC CTAAAAGCCC TTCTGGATCG GGTGCATGCT CTGCCTCGAA AGGTCAGAGG GGCAACGCTA TTCTGTGCCC GATCCGGTGG TAAGCCGGTC TCCTACGACA CATGCAAGAT GGGATTCCGA GCTGCTTGTA AAGCGGCAGG TGTCAAAGGT GCAACCATCC ACGACCTGCG CGCGAAGTCT CTCACCGACA CTGATCGGCA AGGCAACAAC GCTCAGATGC TGGGTGGCCA CACCGACGCC AAGATGACAA AACGCTATCT GCGCTTGAGG GAAATCGATA TAGCCCAGCC TCCCACAATG CCTAAAAAAA GCCTGTAG
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Protein sequence | MRPRKKDRHL PPCMYLKHGA YYLVRKGKWE RLGSDFQEAL LAYAKIVGGK SNGGMSLLID EALDAMRRRL SENTIKQYEA ASVRLKTYLE EFEPRQVLPR HVAALKLHMA DTPNMANRVI SFLRMVFAYA LERQIVDSNP CTGIRRHAEK KRDRYISDAE FAAICAASSE YMSVIWEMCF LTGQRISDVL NIKLSDISDV GIAFEQQKTG AKLIVAMSPD LKALLDRVHA LPRKVRGATL FCARSGGKPV SYDTCKMGFR AACKAAGVKG ATIHDLRAKS LTDTDRQGNN AQMLGGHTDA KMTKRYLRLR EIDIAQPPTM PKKSL
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