Gene PSPTO_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4037 
Symbol 
ID1185717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4544346 
End bp4544879 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID637395384 
Productlysozyme, putative 
Protein accessionNP_793799 
Protein GI28871180 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCA CCGCGCAGCA GTTGCTGCAG ATACTCCCGA GCGCTGGCCA GAAAGCCGGC 
GTTTTTGCAC CCGTCCTGAA CACAGCGATG AGCAAGCACC AGATCTTGAC GCCGCTGCGC
ATCGCGGCTT TCATCGCCCA GGTCGGTCAT GAGTCCGGCC AACTGCGCTA CGTCCGCGAG
ATTTGGGGGC CGACTCCGCA GCAGCTGGGT TATGAAGGCC GCAAGGACCT CGGCAATACC
GTGGCGGGTG ATGGTTCGAA GTACCGCGGG CGCGGCCTGA TCCAGATCAC CGGCCGGGCC
AACTATGCCG AATGCGGCGA GGCGCTGGGC CTAGACCTGA TCCATCACCC GGAACTGCTC
GAGCAGCCGG AGCACGCCAC AATGTCGGCA GCGTGGTACT GGAGCAGCCG TGGCCTGAAC
TCGCTGGCCG ACAAAGGGGA CTTTCTTCAA ATTACCCGAA GAATCAACGG AGGCACCAAT
GGACTGGCGG ATCGGCAGGC GCTGTACGAC CGGGCGCTGA AGGTGCTGGC GTGA
 
Protein sequence
MPITAQQLLQ ILPSAGQKAG VFAPVLNTAM SKHQILTPLR IAAFIAQVGH ESGQLRYVRE 
IWGPTPQQLG YEGRKDLGNT VAGDGSKYRG RGLIQITGRA NYAECGEALG LDLIHHPELL
EQPEHATMSA AWYWSSRGLN SLADKGDFLQ ITRRINGGTN GLADRQALYD RALKVLA