Gene PSPTO_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4024 
Symbolfnr-1 
ID1185703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4534415 
End bp4535194 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID637395371 
Productferredoxin--NADP reductase 
Protein accessionNP_793786 
Protein GI28871167 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.955539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA TGAACCACGA GCGTGTCCTC AGCGTCCACC ATTGGAACGA CACCCTCTTC 
AGTTTCAAGT GCACCCGCGA CCCTGGTCTG CGTTTCGAGA ACGGTCAATT CGTCATGATC
GGTCTGCAGC AGCCCAATGG TCGTCCGCTC ATGCGCGCTT ACTCGATTGC CAGCCCGAAC
TGGGAAGAGC ATCTGGAGTT CTTCAGCATC AAGGTGCCGG ACGGCCCGCT GACCTCGCAG
TTGCAGCACC TCAAGGAAGG CGACGAAATC ATCATCAGCA AGAAGCCTAC GGGTACGCTG
GTGCTGGATG ACCTCAAGCC GGGCAAGCAT CTATACCTGC TGAGCACCGG TACAGGCCTC
GCGCCGTTCA TGAGCGTCAT CCAGGACCCG GAAACCTACG AGCGTTTCGA GAAGGTCATC
CTGTGCCACG GCGTGCGTTA CGTGAACGAG GTCGCCTATC GCGAATTCAT CACCGAGCAC
CTGCCGCAGA ACGAGTTCTT CGGTGAATCG CTGCGCGACA AGCTGATCTA CTACCCGACT
GTCACTCGCG AGCCGTTCGA GAACGAAGGT CGCCTGACCG ATCTGATGCG CAGCGGCAAG
CTGTTCAGCG ACATCGGCCT GCCACCGATC AACCCTCAGG ACGACCGCGC CATGCTGTGC
GGCAGTCCGA GCATGCTCGA CGAAACCAGC GAAGTACTGA ACAGCTTCGG CCTGACTGTG
TCTCCGCGCA TGCGTGAGCC GGGCGATTAT CTGATCGAGC GTGCATTCGT CGAGAAGTAA
 
Protein sequence
MSNMNHERVL SVHHWNDTLF SFKCTRDPGL RFENGQFVMI GLQQPNGRPL MRAYSIASPN 
WEEHLEFFSI KVPDGPLTSQ LQHLKEGDEI IISKKPTGTL VLDDLKPGKH LYLLSTGTGL
APFMSVIQDP ETYERFEKVI LCHGVRYVNE VAYREFITEH LPQNEFFGES LRDKLIYYPT
VTREPFENEG RLTDLMRSGK LFSDIGLPPI NPQDDRAMLC GSPSMLDETS EVLNSFGLTV
SPRMREPGDY LIERAFVEK