Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4024 |
Symbol | fnr-1 |
ID | 1185703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4534415 |
End bp | 4535194 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395371 |
Product | ferredoxin--NADP reductase |
Protein accession | NP_793786 |
Protein GI | 28871167 |
COG category | [C] Energy production and conversion |
COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.955539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACA TGAACCACGA GCGTGTCCTC AGCGTCCACC ATTGGAACGA CACCCTCTTC AGTTTCAAGT GCACCCGCGA CCCTGGTCTG CGTTTCGAGA ACGGTCAATT CGTCATGATC GGTCTGCAGC AGCCCAATGG TCGTCCGCTC ATGCGCGCTT ACTCGATTGC CAGCCCGAAC TGGGAAGAGC ATCTGGAGTT CTTCAGCATC AAGGTGCCGG ACGGCCCGCT GACCTCGCAG TTGCAGCACC TCAAGGAAGG CGACGAAATC ATCATCAGCA AGAAGCCTAC GGGTACGCTG GTGCTGGATG ACCTCAAGCC GGGCAAGCAT CTATACCTGC TGAGCACCGG TACAGGCCTC GCGCCGTTCA TGAGCGTCAT CCAGGACCCG GAAACCTACG AGCGTTTCGA GAAGGTCATC CTGTGCCACG GCGTGCGTTA CGTGAACGAG GTCGCCTATC GCGAATTCAT CACCGAGCAC CTGCCGCAGA ACGAGTTCTT CGGTGAATCG CTGCGCGACA AGCTGATCTA CTACCCGACT GTCACTCGCG AGCCGTTCGA GAACGAAGGT CGCCTGACCG ATCTGATGCG CAGCGGCAAG CTGTTCAGCG ACATCGGCCT GCCACCGATC AACCCTCAGG ACGACCGCGC CATGCTGTGC GGCAGTCCGA GCATGCTCGA CGAAACCAGC GAAGTACTGA ACAGCTTCGG CCTGACTGTG TCTCCGCGCA TGCGTGAGCC GGGCGATTAT CTGATCGAGC GTGCATTCGT CGAGAAGTAA
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Protein sequence | MSNMNHERVL SVHHWNDTLF SFKCTRDPGL RFENGQFVMI GLQQPNGRPL MRAYSIASPN WEEHLEFFSI KVPDGPLTSQ LQHLKEGDEI IISKKPTGTL VLDDLKPGKH LYLLSTGTGL APFMSVIQDP ETYERFEKVI LCHGVRYVNE VAYREFITEH LPQNEFFGES LRDKLIYYPT VTREPFENEG RLTDLMRSGK LFSDIGLPPI NPQDDRAMLC GSPSMLDETS EVLNSFGLTV SPRMREPGDY LIERAFVEK
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