| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4010 |
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| Symbol | |
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| ID | 1185689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4522782 |
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| End bp | 4523486 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637395357 |
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| Product | repressor protein cI |
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| Protein accession | NP_793772 |
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| Protein GI | 28871153 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.895282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCATACA TAAAAAAACC CTTGTCCGAC ACCCTCATGG CCGAAAGCAA AGCAGCAAAT
GCTTTGTTTC TTTCGAAGAA GAACGCGCTG AAACTCACTC AGCGAAAGCT TGCAGAGGCA
GCAGGAATCA CGCCCGCGTC GGTCAACCAG TACCTAAGGG GTATAAATCC ACTGAATGCT
CGATTTGCTG CTGTCTTGGC AAAAATGCTG GAGGAGCCGA TCGAGAGCTT CAGCCCACGG
CTCGCGACTG AAATTTCCGA GATGGCGAAC GTAGGCCCTA TGACCCAGCC TCGTAGAGAG
GCCACCGAGT ACCCTCTGAT AACTTGGGTT GATGCTGGTC AGGGGATAGA ATCGTCTGCC
AGCTACCCTA CTGGCATCTC TGACGAGTGG CTCAGCTCCA CCGAGAGCGC TGGCCCAAAG
GGCTACTGGC TGAGGGTCAA GGGCAAGTCG ATGACCTCCG ATACCCCACC TACATTTCCA
GAGGGAACCC CGATATTGAT CCGCCCGGAG GGCTTCGATC TCATCAGTGG CAAATTCTAT
GTCGCCCGCA ACACCGTCAG CGGGGAGACT ACATTCAAAC AGTTTGTGAT GGACGCGGGT
GTTGGTTACC TGGTGCCGCT TAACCCCAGC TATCAACCAG TTGTGTTGGA TGACGGCTGG
GAAATTATCG GTCGAGCAAT CGACGCAAAG ATAACAGGCA TGTGA
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| Protein sequence | MAYIKKPLSD TLMAESKAAN ALFLSKKNAL KLTQRKLAEA AGITPASVNQ YLRGINPLNA
RFAAVLAKML EEPIESFSPR LATEISEMAN VGPMTQPRRE ATEYPLITWV DAGQGIESSA
SYPTGISDEW LSSTESAGPK GYWLRVKGKS MTSDTPPTFP EGTPILIRPE GFDLISGKFY
VARNTVSGET TFKQFVMDAG VGYLVPLNPS YQPVVLDDGW EIIGRAIDAK ITGM
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