Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3991 |
Symbol | |
ID | 1185669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4499143 |
End bp | 4501785 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395340 |
Product | hypothetical protein |
Protein accession | NP_793755 |
Protein GI | 28871136 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGACA AAATGTCCGA TTCCGATGAA ACAGATGATG CAGAACAACA AGGCTCCGCA CCGCGCCTGA ACTGGCGGGA GCTGCTGAGC AAATACCGAC AGCCTATCGG GCTGGCGGTG ATGCTGCTGT TGTTCGGTCT TGCCCTGATT GCCTGCCGCC ACATGCTGGT CGAAATGGAC TGGTATGCGC TGCACGACTC GTTGTTCGCA GTCCCCCTGC CCGCTCTGGG CGGAGCGCTG CTGGCGGCAG TCATTGGCTA TGTCATTCTC ATGGGCTATG AACTGTCCGC CAGTCGCTAC GCCAACGTCG ACCTGCCGAC CAAAACGCTG ATACTCGGCG GCTTTACCTC GTTTGCCATC GGTAACGCGG TAGGCCTGTC GATGCTCTCC GGTGGATCGG TGCGCTATCG CCTGTACTCA CGCTACGGCG TGGGGGCAAT CGAAATCGCC CGCATGACCG TATTTGCCAG CCTTTCACTC GGCTGCGCGT TGCCACCACT CGCTGCATTG GCAACGCTGA GCAACCTGTC CGGTGCCTCA CTGGCGCTCA AGCTTCCGGT AGAAGTGCTG GCCGTCGTTG CCACAGCCGT ATTGATCGGC AGCCTGCTGC TGGCGGCCTT CGTCTATCGT CGTCGCTTGC CGGAACAGAA CATTGCGCAC AATATTCTGG TCCGCCTGGG TCGCCGCACC CTGCGCCTTC CGAACCTGAA GCTGACCCTG ATCCAGCTGG TGATCACCGC GCTCGACGTC GCCGCCGCCG CGATGGTGCT GTACCTGTTG CTGCCGCATG CGCCACCTCT CGGCGCGTTC ATCCTCATTT ACCTGCTGGC ACTCGCGGCA GGCGTACTCA GTCATGTGCC TGGCGGCGTT GGCGTGTTCG AGGCCATTCT GCTCGCAGCG TTTGCCAACG AACTGGGGGC TGCCCCTCTC GCCGCTGCGC TGCTACTGTA CCGCCTGATC TACGTAGTGC TGCCACTGCT GCTGGCCTGT CTGACCCTGC TGTTTACCGA AGCCCAGCGC CTGCTGCCGA CCAAGCAAGC CATGCGCGTT GCCTCGGGGC TGGCGGCGCC CATTCTGGCC CTACTGGTTT TCTTGTCGGG GGTGGTGCTG CTCTTCTCTG GTGCCACCCC TGAAATCGAT ACCCGGCTGG AAAACGTCGG CTTCATGATT CCGCATCGGC TGATCGACGC TTCGCACTTT GGTGCCAGCC TGGTCGGCGT GCTGTGCCTG CTGCTTGCCC AGGGCCTGCG TCGTCGACTG TCTGCCGCCT GGATGCTGAC GTCCATTTTG CTGCTGGTAG GTGCAGTGCT GTCGATACTC AAGGGCTTCG ACTGGGAAGA GGCCAGCATG CTGCTGCTGA CCGCCTGCCT GCTGCTGACC TTCCGTCGTT CGTTCTACCG TCCAAGTCGC CTGCTGGAGT TGCCGTTCTC GCCGCTCTAC CTGATTGCCA GCATCTGCGT GGTCGGTGCG TCTATCTGGC TGCTGCTGTT CGCTTATCAG GACGTGCCCT ACAGCCATCA ACTGTGGTGG CAATTCACCC TTGATGCGGA CGCGCCGCGC GGGCTGCGTT CGGCGTTGGG CAGTGCGGTG TTGTTGGTCG TGGTCTCGCT GACCTGGCTG CTGCGCACCG CAAGGCCGGT GATCAAGCTG CCCGATGCCG CCGACCTGGA CAAGGCCGCC GAAATTCTCA AGGCCTCCAG CCAGCCCGAT GGTGGGCTGG TTCTGACCGG CGACAAGGCC ATTCTGTTTC ACCCGACCGG CAACGCGTTT CTGATGTACT CGCATCGCGG GCGCAGTCTG GTGGCGCTGT ACGATCCGAT CGGTCCGACC CAACAGCGTG CCGAGCTGAT CTGGCAATTC CGCGACCTGT GCGACGTGCA CCATGCTCGC CCGGTGTTCT ACCAGGTGCG CGCGGAAAAC CTGCCGTTTT ATATGGACAT CGGCCTGACG GCGATCAAGC TTGGCGAAGA AGCGCGTGTG GATTTGCGAC GCTTCGACAT CGAAGCCAAG GGCAAGGAGA TGAAAGACCT GCGCTACACC TGGAACCGTG GTGGGCGTGA CGGGCTTTCG CTGGAAATAT ACGAGCCGGG TCAAGCGCCC ATCGACGAGC TGAAAGTCAT TTCCGATGCC TGGCTAACCG GCAAGAACGT GCGCGAAAAA GGCTTCTCGC TGGGCCGTTT CAGCCCTGAG TACCTTGAGT ATTTCCGCAT TGCCATCGTG CACTTTCAGG GCAAGCCGGT AGCCTTTTCC AACCTGCTGG AAACCACCAG CCCGGAACTG GCCAGCCTAG ACCTGATGCG CTCGCACCCG GACGCTCCGA AACTGACCAT GGAGTTCATG ATGGTCGGTC TGATTCTGCA TTACAAAGCC CAGGGCTACG CACGCTTTAG CCTGGGGATG GTGCCGCTCT CCGGCCTGCA ACCGCGACGC GGCGCGCCGA TCACTCAGCG TTTGGGGTCG ATGATCTTCC GACGCGGCGA ACAGTTGTAC AACTTCCAGG GGCTGCGCCG CTTCAAGGAC AAGTTCCAGC CCGATTGGGA ACCTCGATAT ATGGCCGTGC CTGCCGGACT TGATCCGCTT GTGGCACTGG CTGACACCGC CGCCCTGATT GCGGGCGGCC TGACTGGATT GGTGAAACGC TGA
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Protein sequence | MRDKMSDSDE TDDAEQQGSA PRLNWRELLS KYRQPIGLAV MLLLFGLALI ACRHMLVEMD WYALHDSLFA VPLPALGGAL LAAVIGYVIL MGYELSASRY ANVDLPTKTL ILGGFTSFAI GNAVGLSMLS GGSVRYRLYS RYGVGAIEIA RMTVFASLSL GCALPPLAAL ATLSNLSGAS LALKLPVEVL AVVATAVLIG SLLLAAFVYR RRLPEQNIAH NILVRLGRRT LRLPNLKLTL IQLVITALDV AAAAMVLYLL LPHAPPLGAF ILIYLLALAA GVLSHVPGGV GVFEAILLAA FANELGAAPL AAALLLYRLI YVVLPLLLAC LTLLFTEAQR LLPTKQAMRV ASGLAAPILA LLVFLSGVVL LFSGATPEID TRLENVGFMI PHRLIDASHF GASLVGVLCL LLAQGLRRRL SAAWMLTSIL LLVGAVLSIL KGFDWEEASM LLLTACLLLT FRRSFYRPSR LLELPFSPLY LIASICVVGA SIWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRSALGSAV LLVVVSLTWL LRTARPVIKL PDAADLDKAA EILKASSQPD GGLVLTGDKA ILFHPTGNAF LMYSHRGRSL VALYDPIGPT QQRAELIWQF RDLCDVHHAR PVFYQVRAEN LPFYMDIGLT AIKLGEEARV DLRRFDIEAK GKEMKDLRYT WNRGGRDGLS LEIYEPGQAP IDELKVISDA WLTGKNVREK GFSLGRFSPE YLEYFRIAIV HFQGKPVAFS NLLETTSPEL ASLDLMRSHP DAPKLTMEFM MVGLILHYKA QGYARFSLGM VPLSGLQPRR GAPITQRLGS MIFRRGEQLY NFQGLRRFKD KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR
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