Gene PSPTO_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3991 
Symbol 
ID1185669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4499143 
End bp4501785 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content62% 
IMG OID637395340 
Producthypothetical protein 
Protein accessionNP_793755 
Protein GI28871136 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGACA AAATGTCCGA TTCCGATGAA ACAGATGATG CAGAACAACA AGGCTCCGCA 
CCGCGCCTGA ACTGGCGGGA GCTGCTGAGC AAATACCGAC AGCCTATCGG GCTGGCGGTG
ATGCTGCTGT TGTTCGGTCT TGCCCTGATT GCCTGCCGCC ACATGCTGGT CGAAATGGAC
TGGTATGCGC TGCACGACTC GTTGTTCGCA GTCCCCCTGC CCGCTCTGGG CGGAGCGCTG
CTGGCGGCAG TCATTGGCTA TGTCATTCTC ATGGGCTATG AACTGTCCGC CAGTCGCTAC
GCCAACGTCG ACCTGCCGAC CAAAACGCTG ATACTCGGCG GCTTTACCTC GTTTGCCATC
GGTAACGCGG TAGGCCTGTC GATGCTCTCC GGTGGATCGG TGCGCTATCG CCTGTACTCA
CGCTACGGCG TGGGGGCAAT CGAAATCGCC CGCATGACCG TATTTGCCAG CCTTTCACTC
GGCTGCGCGT TGCCACCACT CGCTGCATTG GCAACGCTGA GCAACCTGTC CGGTGCCTCA
CTGGCGCTCA AGCTTCCGGT AGAAGTGCTG GCCGTCGTTG CCACAGCCGT ATTGATCGGC
AGCCTGCTGC TGGCGGCCTT CGTCTATCGT CGTCGCTTGC CGGAACAGAA CATTGCGCAC
AATATTCTGG TCCGCCTGGG TCGCCGCACC CTGCGCCTTC CGAACCTGAA GCTGACCCTG
ATCCAGCTGG TGATCACCGC GCTCGACGTC GCCGCCGCCG CGATGGTGCT GTACCTGTTG
CTGCCGCATG CGCCACCTCT CGGCGCGTTC ATCCTCATTT ACCTGCTGGC ACTCGCGGCA
GGCGTACTCA GTCATGTGCC TGGCGGCGTT GGCGTGTTCG AGGCCATTCT GCTCGCAGCG
TTTGCCAACG AACTGGGGGC TGCCCCTCTC GCCGCTGCGC TGCTACTGTA CCGCCTGATC
TACGTAGTGC TGCCACTGCT GCTGGCCTGT CTGACCCTGC TGTTTACCGA AGCCCAGCGC
CTGCTGCCGA CCAAGCAAGC CATGCGCGTT GCCTCGGGGC TGGCGGCGCC CATTCTGGCC
CTACTGGTTT TCTTGTCGGG GGTGGTGCTG CTCTTCTCTG GTGCCACCCC TGAAATCGAT
ACCCGGCTGG AAAACGTCGG CTTCATGATT CCGCATCGGC TGATCGACGC TTCGCACTTT
GGTGCCAGCC TGGTCGGCGT GCTGTGCCTG CTGCTTGCCC AGGGCCTGCG TCGTCGACTG
TCTGCCGCCT GGATGCTGAC GTCCATTTTG CTGCTGGTAG GTGCAGTGCT GTCGATACTC
AAGGGCTTCG ACTGGGAAGA GGCCAGCATG CTGCTGCTGA CCGCCTGCCT GCTGCTGACC
TTCCGTCGTT CGTTCTACCG TCCAAGTCGC CTGCTGGAGT TGCCGTTCTC GCCGCTCTAC
CTGATTGCCA GCATCTGCGT GGTCGGTGCG TCTATCTGGC TGCTGCTGTT CGCTTATCAG
GACGTGCCCT ACAGCCATCA ACTGTGGTGG CAATTCACCC TTGATGCGGA CGCGCCGCGC
GGGCTGCGTT CGGCGTTGGG CAGTGCGGTG TTGTTGGTCG TGGTCTCGCT GACCTGGCTG
CTGCGCACCG CAAGGCCGGT GATCAAGCTG CCCGATGCCG CCGACCTGGA CAAGGCCGCC
GAAATTCTCA AGGCCTCCAG CCAGCCCGAT GGTGGGCTGG TTCTGACCGG CGACAAGGCC
ATTCTGTTTC ACCCGACCGG CAACGCGTTT CTGATGTACT CGCATCGCGG GCGCAGTCTG
GTGGCGCTGT ACGATCCGAT CGGTCCGACC CAACAGCGTG CCGAGCTGAT CTGGCAATTC
CGCGACCTGT GCGACGTGCA CCATGCTCGC CCGGTGTTCT ACCAGGTGCG CGCGGAAAAC
CTGCCGTTTT ATATGGACAT CGGCCTGACG GCGATCAAGC TTGGCGAAGA AGCGCGTGTG
GATTTGCGAC GCTTCGACAT CGAAGCCAAG GGCAAGGAGA TGAAAGACCT GCGCTACACC
TGGAACCGTG GTGGGCGTGA CGGGCTTTCG CTGGAAATAT ACGAGCCGGG TCAAGCGCCC
ATCGACGAGC TGAAAGTCAT TTCCGATGCC TGGCTAACCG GCAAGAACGT GCGCGAAAAA
GGCTTCTCGC TGGGCCGTTT CAGCCCTGAG TACCTTGAGT ATTTCCGCAT TGCCATCGTG
CACTTTCAGG GCAAGCCGGT AGCCTTTTCC AACCTGCTGG AAACCACCAG CCCGGAACTG
GCCAGCCTAG ACCTGATGCG CTCGCACCCG GACGCTCCGA AACTGACCAT GGAGTTCATG
ATGGTCGGTC TGATTCTGCA TTACAAAGCC CAGGGCTACG CACGCTTTAG CCTGGGGATG
GTGCCGCTCT CCGGCCTGCA ACCGCGACGC GGCGCGCCGA TCACTCAGCG TTTGGGGTCG
ATGATCTTCC GACGCGGCGA ACAGTTGTAC AACTTCCAGG GGCTGCGCCG CTTCAAGGAC
AAGTTCCAGC CCGATTGGGA ACCTCGATAT ATGGCCGTGC CTGCCGGACT TGATCCGCTT
GTGGCACTGG CTGACACCGC CGCCCTGATT GCGGGCGGCC TGACTGGATT GGTGAAACGC
TGA
 
Protein sequence
MRDKMSDSDE TDDAEQQGSA PRLNWRELLS KYRQPIGLAV MLLLFGLALI ACRHMLVEMD 
WYALHDSLFA VPLPALGGAL LAAVIGYVIL MGYELSASRY ANVDLPTKTL ILGGFTSFAI
GNAVGLSMLS GGSVRYRLYS RYGVGAIEIA RMTVFASLSL GCALPPLAAL ATLSNLSGAS
LALKLPVEVL AVVATAVLIG SLLLAAFVYR RRLPEQNIAH NILVRLGRRT LRLPNLKLTL
IQLVITALDV AAAAMVLYLL LPHAPPLGAF ILIYLLALAA GVLSHVPGGV GVFEAILLAA
FANELGAAPL AAALLLYRLI YVVLPLLLAC LTLLFTEAQR LLPTKQAMRV ASGLAAPILA
LLVFLSGVVL LFSGATPEID TRLENVGFMI PHRLIDASHF GASLVGVLCL LLAQGLRRRL
SAAWMLTSIL LLVGAVLSIL KGFDWEEASM LLLTACLLLT FRRSFYRPSR LLELPFSPLY
LIASICVVGA SIWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRSALGSAV LLVVVSLTWL
LRTARPVIKL PDAADLDKAA EILKASSQPD GGLVLTGDKA ILFHPTGNAF LMYSHRGRSL
VALYDPIGPT QQRAELIWQF RDLCDVHHAR PVFYQVRAEN LPFYMDIGLT AIKLGEEARV
DLRRFDIEAK GKEMKDLRYT WNRGGRDGLS LEIYEPGQAP IDELKVISDA WLTGKNVREK
GFSLGRFSPE YLEYFRIAIV HFQGKPVAFS NLLETTSPEL ASLDLMRSHP DAPKLTMEFM
MVGLILHYKA QGYARFSLGM VPLSGLQPRR GAPITQRLGS MIFRRGEQLY NFQGLRRFKD
KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR