Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3984 |
Symbol | |
ID | 1185660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4490988 |
End bp | 4491209 |
Gene Length | 222 bp |
Protein Length | 73 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395331 |
Product | cold shock domain family protein |
Protein accession | NP_793748 |
Protein GI | 28871129 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.231003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATC GCGATACTGG CACCGTAAAG TGGTTCAACA CATCCAAAGG CTTCGGCTTT ATCTCCCGGG ATTCGGGCGA CGATATTTTT GTGCATTTTC GAGCCATTCG CGGTGAAGGT CACCGCGTGC TGGTCGAGGG CCAACGCGTC GAGTTCTCTG TCATGAACCG CGACAAGGGC CTGCAGGCTG AAGATGTCAT CGCTGCCCTG CCCCGCCGCT GA
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Protein sequence | MGNRDTGTVK WFNTSKGFGF ISRDSGDDIF VHFRAIRGEG HRVLVEGQRV EFSVMNRDKG LQAEDVIAAL PRR
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