| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3978 |
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| Symbol | ruvA |
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| ID | 1185654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4484657 |
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| End bp | 4485265 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395325 |
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| Product | Holliday junction DNA helicase RuvA |
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| Protein accession | NP_793742 |
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| Protein GI | 28871123 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
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| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0282687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTGGAC GTTTACGCGG CGCCATTGCC GAAAAACAGC CTCCGCACCT GGTGTTGGAT
GTCAACGGCG TTGGCTATGA GCTGGAAGTG CCGATGACGA CGCTGTACAG GCTGCCGCAT
GTCGGCGAGA CCGTGACCTT GCACACCCAT CTGGTGGTTC GCGAGGACGC GCATCTGCTG
TATGGCTTCT ATGAAAAACG CGAGCGTGAG CTGTTTCGTG AGCTGATCCG TCTGAACGGC
GTCGGGCCGA AGCTGGCGCT GGCATTGATG TCCGGTCTGG AAGTCGATGA GCTGGTGCGC
TGCGTTCAGG CTCAGGATAC GTCCGCGCTG ACCCGTATCC CCGGTGTCGG CAAGAAGACT
GCCGAACGTC TGCTGGTCGA GCTCAAGGAT CGTTTCAAGG CCTGGGAGAG CTTGCCAGGC
ACTTTTACAC TGGTTTCCAA TGGTCCGAAT CACGCAGATC CCGTGGCCTC GGCCGAGTCC
GATGCGGTCA GTGCGCTGAT TTCGCTGGGC TACAAACCTC AGGAGGCGAG CAAGGCCGTC
TCCGCGATCA AGGAAAAAGA CTTGAGCAGT GCAGATCTGA TTCGCCGTGC GTTGAAGGGG
ATGGGTTAA
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| Protein sequence | MIGRLRGAIA EKQPPHLVLD VNGVGYELEV PMTTLYRLPH VGETVTLHTH LVVREDAHLL
YGFYEKRERE LFRELIRLNG VGPKLALALM SGLEVDELVR CVQAQDTSAL TRIPGVGKKT
AERLLVELKD RFKAWESLPG TFTLVSNGPN HADPVASAES DAVSALISLG YKPQEASKAV
SAIKEKDLSS ADLIRRALKG MG
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