| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3973 |
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| Symbol | tolA |
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| ID | 1185649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4480759 |
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| End bp | 4481829 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637395320 |
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| Product | tolA protein |
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| Protein accession | NP_793737 |
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| Protein GI | 28871118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2268] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0266991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCCGA TTCGAGAGCC GTCCGCCTCG GAAAGCTTCT TCTGGCCCAG TGTCTGGGCC
GTGGCATTGC ATATCCTGAT TTTCGGCATG CTGTTCGTCA GTTTTGCCAT GACTCCGGAT
CTGCCCGAAG CCAAGCCTAT CGTTCAGGCA ACGCTCTATC AGCTCAAGTC CAAGAGCCAG
GCCACTACCC AGACCAACCA GAAGATTGCC GGTGAGGCGA AGAAAACTGC TGCGCGACAG
ACTGAAGTCG AACAGCTGGA GCAGAAAAAG ATCGAGCAGC TCAAACAGGA AGCTGTAAAA
GCTGCGGAAC AAAAGAAAGA AGAGTCGGCT CAAAAAGCCG AAGAGCAGAA AGCCGCCGAC
GAGGCCAAGA AAGCCGAGCA GAAGGCAGAA GAGGCCAAAA AGGCTGATGA TGCAAAGAAA
GCTGACGAAG CCAAGAAGGT CGCTGACGCT AAAAAGGTTG AAGAAAAACA ATTGGCTGAT
ATAGCCAAGA AGAAAGCCGA AGACGAGGCG AAGAAAAAAG CCGAGGAAGA CGCCAAGAAA
GCTGCTGCCG AGGAAGCCAA GAAACAGGCT GCTGATGAGG CCAAGAAAAA GGCCGCAGAA
GACGCCAAGA AAAAGGCTGC CGAGGACGCG AAGAAAAAAG CCGCTGCCGA TTCTGCCAAG
AAGGCGCAGG AAGCAGCTCG TAAATCAGCT GAAGACAAGA AGGCGCAGGC ACTGGCCGAT
TTGCTGTCCG ACAAACCGGA ACGGCAACAG GCTTTGGCTG ACGAACGTGG CGATGAGACG
GCTGGCAGTT TCGATGATCT GATTCGTGTT CGGGCGTCCG AGGGCTGGAG TCGTCCTCCA
TCGGCACGTA ACAACATGTC GGTAACGTTG CAGATCGGAA TGTTGCCGGA CGGTACGATT
GCTTCCGTAT CGATTGCCAA GTCCAGTGGA GACGGGCCGT TTGACAGCTC TGCAGTTGCA
GCGGTGAAGA ACATTGGACG TTTGACAGAA ATGCAGGGTC TGAAGCCGGC TGACTTCGCT
CCCTATCGTT CATTCAAGAT GACATTCACA CCTGGAGATC TAGCCTTGTG A
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| Protein sequence | MQPIREPSAS ESFFWPSVWA VALHILIFGM LFVSFAMTPD LPEAKPIVQA TLYQLKSKSQ
ATTQTNQKIA GEAKKTAARQ TEVEQLEQKK IEQLKQEAVK AAEQKKEESA QKAEEQKAAD
EAKKAEQKAE EAKKADDAKK ADEAKKVADA KKVEEKQLAD IAKKKAEDEA KKKAEEDAKK
AAAEEAKKQA ADEAKKKAAE DAKKKAAEDA KKKAAADSAK KAQEAARKSA EDKKAQALAD
LLSDKPERQQ ALADERGDET AGSFDDLIRV RASEGWSRPP SARNNMSVTL QIGMLPDGTI
ASVSIAKSSG DGPFDSSAVA AVKNIGRLTE MQGLKPADFA PYRSFKMTFT PGDLAL
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