| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3966 |
|---|
| Symbol | |
|---|
| ID | 1185641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4474543 |
|---|
| End bp | 4474902 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637395313 |
|---|
| Product | ISPsy5, Orf1 |
|---|
| Protein accession | NP_793731 |
|---|
| Protein GI | 28871112 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0343547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAC CCGACGCCAA AGTCGAAAAA GTGTACCTCT ACCCCAAGCC TGTGGATTTC
CGAAAATCTA TCGATGGCCT TGCTGCGCTG GTTGAACTGG ACATCAAAGT CGCCGTGTTC
GACCCCGTGC TTTTTGTTTT TCTGAATCGC CACCGTAACC GGGTGAAAAT ACTTTATTGG
GAGCGCAACG GCTTCTGTCT TTGGCTCAAG CGTTTGGAGT CCGAGCGGTT CAAAACCTCT
CCCGATGAGA CGGACGAGGC CATCGTGCTG ACGGTCCAGG AACTGAACTG GTTACTGGAT
GGATTTGATC TCTGGCGTAA CCGTCCGCAC AAGGTTTTGA CTCCACGATT TGTCGCCTGA
|
|---|
| Protein sequence | MMRPDAKVEK VYLYPKPVDF RKSIDGLAAL VELDIKVAVF DPVLFVFLNR HRNRVKILYW
ERNGFCLWLK RLESERFKTS PDETDEAIVL TVQELNWLLD GFDLWRNRPH KVLTPRFVA
|
|---|
| |